RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
SRRM1-203ENST00000447431 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.12
SRRM1-203ENST00000447431 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
SRRM1-203ENST00000447431 MT2AP02795 61 aa1.81□□□□□ -2.12
SRRM1-203ENST00000447431 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
SRRM1-203ENST00000447431 MT1FP04733 61 aa1.79□□□□□ -2.12
SRRM1-203ENST00000447431 KRTAP10-5P60370 271 aa1.79□□□□□ -2.12
SRRM1-203ENST00000447431 MT1XP80297 61 aa1.79□□□□□ -2.12
SRRM1-203ENST00000447431 MT1HP80294 61 aa1.78□□□□□ -2.13
SRRM1-203ENST00000447431 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.13
SRRM1-203ENST00000447431 KRTAP10-7P60409 375 aaPredicted RBP1.76□□□□□ -2.13
SRRM1-203ENST00000447431 MT1BP07438 61 aa1.76□□□□□ -2.13
SRRM1-203ENST00000447431 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
SRRM1-203ENST00000447431 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
SRRM1-203ENST00000447431 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
SRRM1-203ENST00000447431 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
SRRM1-203ENST00000447431 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
SRRM1-203ENST00000447431 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
SRRM1-203ENST00000447431 USH2AO75445 5202 aa1.69□□□□□ -2.14
SRRM1-203ENST00000447431 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
SRRM1-203ENST00000447431 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
SRRM1-203ENST00000447431 LCE1EQ5T753 118 aa1.65□□□□□ -2.14
SRRM1-203ENST00000447431 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
SRRM1-203ENST00000447431 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
SRRM1-203ENST00000447431 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
SRRM1-203ENST00000447431 MT1LQ93083 61 aa1.6□□□□□ -2.15
SRRM1-203ENST00000447431 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
SRRM1-203ENST00000447431 MT1EP04732 61 aa1.56□□□□□ -2.16
SRRM1-203ENST00000447431 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
SRRM1-203ENST00000447431 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
SRRM1-203ENST00000447431 MT1GP13640 62 aa1.54□□□□□ -2.16
SRRM1-203ENST00000447431 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
SRRM1-203ENST00000447431 KMT2DO14686 5537 aa1.53□□□□□ -2.16
SRRM1-203ENST00000447431 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
SRRM1-203ENST00000447431 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
SRRM1-203ENST00000447431 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
SRRM1-203ENST00000447431 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
SRRM1-203ENST00000447431 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
SRRM1-203ENST00000447431 PRM1P04553 51 aa1.48□□□□□ -2.17
SRRM1-203ENST00000447431 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
SRRM1-203ENST00000447431 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
SRRM1-203ENST00000447431 MT1AP04731 61 aa1.47□□□□□ -2.17
SRRM1-203ENST00000447431 MT1MQ8N339 61 aa1.47□□□□□ -2.17
SRRM1-203ENST00000447431 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
SRRM1-203ENST00000447431 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
SRRM1-203ENST00000447431 KRTAP4-3Q9BYR4 195 aa1.43□□□□□ -2.18
SRRM1-203ENST00000447431 SPRR2FQ96RM1 72 aa1.4□□□□□ -2.19
SRRM1-203ENST00000447431 NEBP20929 6669 aa1.4□□□□□ -2.19
SRRM1-203ENST00000447431 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
SRRM1-203ENST00000447431 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
SRRM1-203ENST00000447431 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
SRRM1-203ENST00000447431 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
SRRM1-203ENST00000447431 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
SRRM1-203ENST00000447431 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
SRRM1-203ENST00000447431 SPRR2AP35326 72 aa1.32□□□□□ -2.2
SRRM1-203ENST00000447431 KRTAP5-5Q701N2 237 aaPredicted RBP1.31□□□□□ -2.2
SRRM1-203ENST00000447431 SPRR2EP22531 72 aa1.3□□□□□ -2.2
SRRM1-203ENST00000447431 SPRR2BP35325 72 aa1.3□□□□□ -2.2
SRRM1-203ENST00000447431 KRTAP5-9P26371 169 aa1.29□□□□□ -2.2
SRRM1-203ENST00000447431 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
SRRM1-203ENST00000447431 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
SRRM1-203ENST00000447431 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
SRRM1-203ENST00000447431 SPRR2DP22532 72 aa1.24□□□□□ -2.21
SRRM1-203ENST00000447431 MT4P47944 62 aa1.16□□□□□ -2.22
SRRM1-203ENST00000447431 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
SRRM1-203ENST00000447431 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
SRRM1-203ENST00000447431 MUC19Q7Z5P9 8384 aa1.07□□□□□ -2.24
SRRM1-203ENST00000447431 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
SRRM1-203ENST00000447431 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
SRRM1-203ENST00000447431 KRTAP5-2Q701N4 177 aa1.04□□□□□ -2.24
SRRM1-203ENST00000447431 KRTAP5-8O75690 187 aa1.02□□□□□ -2.25
SRRM1-203ENST00000447431 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
SRRM1-203ENST00000447431 KRTAP20-2Q3LI61 65 aa0.98□□□□□ -2.25
SRRM1-203ENST00000447431 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SRRM1-203ENST00000447431 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
SRRM1-203ENST00000447431 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
SRRM1-203ENST00000447431 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 22.7 ms