RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 KRTAP4-8Q9BYQ9 185 aa2.88□□□□□ -1.95
TNRC6B-205ENST00000446273 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
TNRC6B-205ENST00000446273 MT1LQ93083 61 aa2.8□□□□□ -1.96
TNRC6B-205ENST00000446273 KRTAP9-7A8MTY7 169 aa2.78□□□□□ -1.96
TNRC6B-205ENST00000446273 MT1EP04732 61 aa2.78□□□□□ -1.96
TNRC6B-205ENST00000446273 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.97
TNRC6B-205ENST00000446273 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
TNRC6B-205ENST00000446273 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
TNRC6B-205ENST00000446273 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
TNRC6B-205ENST00000446273 MT1MQ8N339 61 aa2.65□□□□□ -1.99
TNRC6B-205ENST00000446273 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
TNRC6B-205ENST00000446273 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
TNRC6B-205ENST00000446273 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
TNRC6B-205ENST00000446273 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
TNRC6B-205ENST00000446273 MT3P25713 68 aa2.6□□□□□ -1.99
TNRC6B-205ENST00000446273 USH2AO75445 5202 aa2.6□□□□□ -1.99
TNRC6B-205ENST00000446273 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
TNRC6B-205ENST00000446273 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
TNRC6B-205ENST00000446273 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
TNRC6B-205ENST00000446273 KRTAP4-7Q9BYR0 210 aa2.59□□□□□ -2
TNRC6B-205ENST00000446273 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TNRC6B-205ENST00000446273 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
TNRC6B-205ENST00000446273 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
TNRC6B-205ENST00000446273 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
TNRC6B-205ENST00000446273 KMT2DO14686 5537 aa2.52□□□□□ -2.01
TNRC6B-205ENST00000446273 MT4P47944 62 aa2.52□□□□□ -2.01
TNRC6B-205ENST00000446273 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
TNRC6B-205ENST00000446273 MT1AP04731 61 aa2.51□□□□□ -2.01
TNRC6B-205ENST00000446273 KRTAP2-2Q9BYT5 123 aa2.5□□□□□ -2.01
TNRC6B-205ENST00000446273 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
TNRC6B-205ENST00000446273 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
TNRC6B-205ENST00000446273 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
TNRC6B-205ENST00000446273 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
TNRC6B-205ENST00000446273 LOC100996750A0A140TA64 210 aa2.43□□□□□ -2.02
TNRC6B-205ENST00000446273 KRTAP9-6A8MVA2 160 aa2.42□□□□□ -2.02
TNRC6B-205ENST00000446273 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
TNRC6B-205ENST00000446273 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
TNRC6B-205ENST00000446273 NEBP20929 6669 aa2.34□□□□□ -2.04
TNRC6B-205ENST00000446273 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
TNRC6B-205ENST00000446273 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
TNRC6B-205ENST00000446273 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
TNRC6B-205ENST00000446273 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
TNRC6B-205ENST00000446273 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
TNRC6B-205ENST00000446273 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
TNRC6B-205ENST00000446273 PRM1P04553 51 aa2.26□□□□□ -2.05
TNRC6B-205ENST00000446273 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
TNRC6B-205ENST00000446273 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
TNRC6B-205ENST00000446273 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
TNRC6B-205ENST00000446273 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
TNRC6B-205ENST00000446273 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
TNRC6B-205ENST00000446273 KRTAP4-6Q9BYQ5 205 aa2.07□□□□□ -2.08
TNRC6B-205ENST00000446273 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
TNRC6B-205ENST00000446273 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
TNRC6B-205ENST00000446273 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
TNRC6B-205ENST00000446273 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
TNRC6B-205ENST00000446273 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
TNRC6B-205ENST00000446273 KRTAP4-11Q9BYQ6 195 aa1.86□□□□□ -2.11
TNRC6B-205ENST00000446273 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
TNRC6B-205ENST00000446273 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
TNRC6B-205ENST00000446273 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
TNRC6B-205ENST00000446273 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
TNRC6B-205ENST00000446273 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
TNRC6B-205ENST00000446273 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
TNRC6B-205ENST00000446273 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
TNRC6B-205ENST00000446273 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
TNRC6B-205ENST00000446273 KRTAP4-2Q9BYR5 136 aa1.63□□□□□ -2.15
TNRC6B-205ENST00000446273 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
TNRC6B-205ENST00000446273 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
TNRC6B-205ENST00000446273 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
TNRC6B-205ENST00000446273 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
TNRC6B-205ENST00000446273 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
TNRC6B-205ENST00000446273 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
TNRC6B-205ENST00000446273 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
TNRC6B-205ENST00000446273 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
TNRC6B-205ENST00000446273 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
TNRC6B-205ENST00000446273 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
TNRC6B-205ENST00000446273 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
TNRC6B-205ENST00000446273 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 20 ms