RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
LTBR-204ENST00000444814 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
LTBR-204ENST00000444814 A0A0D9SG42 100 aa5.02□□□□□ -1.61
LTBR-204ENST00000444814 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
LTBR-204ENST00000444814 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
LTBR-204ENST00000444814 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
LTBR-204ENST00000444814 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
LTBR-204ENST00000444814 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
LTBR-204ENST00000444814 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
LTBR-204ENST00000444814 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
LTBR-204ENST00000444814 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
LTBR-204ENST00000444814 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
LTBR-204ENST00000444814 SPRR2EP22531 72 aa4.76□□□□□ -1.65
LTBR-204ENST00000444814 SPRR2BP35325 72 aa4.76□□□□□ -1.65
LTBR-204ENST00000444814 SPRR2AP35326 72 aa4.76□□□□□ -1.65
LTBR-204ENST00000444814 TNP1P09430 55 aa4.73□□□□□ -1.65
LTBR-204ENST00000444814 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
LTBR-204ENST00000444814 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
LTBR-204ENST00000444814 KMT2DO14686 5537 aa4.67□□□□□ -1.66
LTBR-204ENST00000444814 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
LTBR-204ENST00000444814 NEBP20929 6669 aa4.66□□□□□ -1.66
LTBR-204ENST00000444814 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
LTBR-204ENST00000444814 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
LTBR-204ENST00000444814 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
LTBR-204ENST00000444814 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
LTBR-204ENST00000444814 SPRR2DP22532 72 aa4.61□□□□□ -1.67
LTBR-204ENST00000444814 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
LTBR-204ENST00000444814 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
LTBR-204ENST00000444814 MT1EP04732 61 aa4.53□□□□□ -1.69
LTBR-204ENST00000444814 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
LTBR-204ENST00000444814 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
LTBR-204ENST00000444814 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
LTBR-204ENST00000444814 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
LTBR-204ENST00000444814 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
LTBR-204ENST00000444814 MT1GP13640 62 aa4.44□□□□□ -1.7
LTBR-204ENST00000444814 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
LTBR-204ENST00000444814 MT1LQ93083 61 aa4.36□□□□□ -1.71
LTBR-204ENST00000444814 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
LTBR-204ENST00000444814 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
LTBR-204ENST00000444814 MT1MQ8N339 61 aa4.3□□□□□ -1.72
LTBR-204ENST00000444814 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
LTBR-204ENST00000444814 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
LTBR-204ENST00000444814 MT3P25713 68 aa4.15□□□□□ -1.74
LTBR-204ENST00000444814 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
LTBR-204ENST00000444814 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
LTBR-204ENST00000444814 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
LTBR-204ENST00000444814 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
LTBR-204ENST00000444814 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
LTBR-204ENST00000444814 MT4P47944 62 aa3.97□□□□□ -1.77
LTBR-204ENST00000444814 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
LTBR-204ENST00000444814 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
LTBR-204ENST00000444814 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
LTBR-204ENST00000444814 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
LTBR-204ENST00000444814 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
LTBR-204ENST00000444814 MT1AP04731 61 aa3.75□□□□□ -1.81
LTBR-204ENST00000444814 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
LTBR-204ENST00000444814 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.82
LTBR-204ENST00000444814 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
LTBR-204ENST00000444814 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
LTBR-204ENST00000444814 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
LTBR-204ENST00000444814 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
LTBR-204ENST00000444814 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
LTBR-204ENST00000444814 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
LTBR-204ENST00000444814 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.85
LTBR-204ENST00000444814 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
LTBR-204ENST00000444814 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
LTBR-204ENST00000444814 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
LTBR-204ENST00000444814 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
LTBR-204ENST00000444814 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
LTBR-204ENST00000444814 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
LTBR-204ENST00000444814 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
LTBR-204ENST00000444814 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
LTBR-204ENST00000444814 PRM1P04553 51 aa2.71□□□□□ -1.98
LTBR-204ENST00000444814 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
LTBR-204ENST00000444814 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
LTBR-204ENST00000444814 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
LTBR-204ENST00000444814 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
LTBR-204ENST00000444814 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 60.7 ms