RNA–Protein interactions for RNA: ENST00000443002.5

POLR2F-206, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 1,890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-206ENST00000443002 KRTAP2-1Q9BYU5 128 aa7.49□□□□□ -1.21
POLR2F-206ENST00000443002 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.23
POLR2F-206ENST00000443002 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.23
POLR2F-206ENST00000443002 MT1GP13640 62 aa7.36□□□□□ -1.23
POLR2F-206ENST00000443002 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
POLR2F-206ENST00000443002 MT1MQ8N339 61 aa7.28□□□□□ -1.24
POLR2F-206ENST00000443002 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
POLR2F-206ENST00000443002 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
POLR2F-206ENST00000443002 KRTAP4-3Q9BYR4 195 aa7.14□□□□□ -1.27
POLR2F-206ENST00000443002 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
POLR2F-206ENST00000443002 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
POLR2F-206ENST00000443002 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
POLR2F-206ENST00000443002 KRTAP4-12Q9BQ66 201 aa7.01□□□□□ -1.29
POLR2F-206ENST00000443002 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.29
POLR2F-206ENST00000443002 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
POLR2F-206ENST00000443002 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
POLR2F-206ENST00000443002 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
POLR2F-206ENST00000443002 KRTAP5-9P26371 169 aa6.79□□□□□ -1.32
POLR2F-206ENST00000443002 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.32
POLR2F-206ENST00000443002 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
POLR2F-206ENST00000443002 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
POLR2F-206ENST00000443002 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
POLR2F-206ENST00000443002 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
POLR2F-206ENST00000443002 MT1AP04731 61 aa6.58□□□□□ -1.36
POLR2F-206ENST00000443002 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
POLR2F-206ENST00000443002 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
POLR2F-206ENST00000443002 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
POLR2F-206ENST00000443002 SPRR2EP22531 72 aa6.51□□□□□ -1.37
POLR2F-206ENST00000443002 SPRR2BP35325 72 aa6.51□□□□□ -1.37
POLR2F-206ENST00000443002 SPRR2AP35326 72 aa6.51□□□□□ -1.37
POLR2F-206ENST00000443002 KRTAP6-1Q3LI64 71 aa6.51□□□□□ -1.37
POLR2F-206ENST00000443002 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
POLR2F-206ENST00000443002 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
POLR2F-206ENST00000443002 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
POLR2F-206ENST00000443002 MDN1Q9NU22 5596 aa6.4□□□□□ -1.39
POLR2F-206ENST00000443002 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
POLR2F-206ENST00000443002 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
POLR2F-206ENST00000443002 SPRR2DP22532 72 aa6.25□□□□□ -1.41
POLR2F-206ENST00000443002 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
POLR2F-206ENST00000443002 LCE3DQ9BYE3 92 aa6.22□□□□□ -1.41
POLR2F-206ENST00000443002 LCE3EQ5T5B0 92 aa6.14□□□□□ -1.43
POLR2F-206ENST00000443002 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
POLR2F-206ENST00000443002 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
POLR2F-206ENST00000443002 MT3P25713 68 aa5.94□□□□□ -1.46
POLR2F-206ENST00000443002 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
POLR2F-206ENST00000443002 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
POLR2F-206ENST00000443002 KRTAP4-2Q9BYR5 136 aa5.78□□□□□ -1.48
POLR2F-206ENST00000443002 NEBP20929 6669 aa5.78□□□□□ -1.48
POLR2F-206ENST00000443002 PRM1P04553 51 aa5.67□□□□□ -1.5
POLR2F-206ENST00000443002 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
POLR2F-206ENST00000443002 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
POLR2F-206ENST00000443002 MT4P47944 62 aa5.39□□□□□ -1.55
POLR2F-206ENST00000443002 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
POLR2F-206ENST00000443002 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
POLR2F-206ENST00000443002 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
POLR2F-206ENST00000443002 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
POLR2F-206ENST00000443002 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
POLR2F-206ENST00000443002 LCE1EQ5T753 118 aa5□□□□□ -1.61
POLR2F-206ENST00000443002 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
POLR2F-206ENST00000443002 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
POLR2F-206ENST00000443002 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
POLR2F-206ENST00000443002 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
POLR2F-206ENST00000443002 LCE1FQ5T754 118 aa4.65□□□□□ -1.66
POLR2F-206ENST00000443002 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
POLR2F-206ENST00000443002 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
POLR2F-206ENST00000443002 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
POLR2F-206ENST00000443002 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
POLR2F-206ENST00000443002 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
POLR2F-206ENST00000443002 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
POLR2F-206ENST00000443002 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
POLR2F-206ENST00000443002 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
POLR2F-206ENST00000443002 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
POLR2F-206ENST00000443002 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
POLR2F-206ENST00000443002 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
POLR2F-206ENST00000443002 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
POLR2F-206ENST00000443002 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
POLR2F-206ENST00000443002 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
POLR2F-206ENST00000443002 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms