RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
USP1-203ENST00000442679 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
USP1-203ENST00000442679 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
USP1-203ENST00000442679 SPRR2EP22531 72 aa4.72□□□□□ -1.65
USP1-203ENST00000442679 SPRR2BP35325 72 aa4.72□□□□□ -1.65
USP1-203ENST00000442679 SPRR2AP35326 72 aa4.72□□□□□ -1.65
USP1-203ENST00000442679 A6NED7 52 aa4.68□□□□□ -1.66
USP1-203ENST00000442679 K7ERS5 55 aa4.67□□□□□ -1.66
USP1-203ENST00000442679 TNP1P09430 55 aa4.67□□□□□ -1.66
USP1-203ENST00000442679 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
USP1-203ENST00000442679 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
USP1-203ENST00000442679 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
USP1-203ENST00000442679 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
USP1-203ENST00000442679 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
USP1-203ENST00000442679 MT1EP04732 61 aa4.57□□□□□ -1.68
USP1-203ENST00000442679 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
USP1-203ENST00000442679 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
USP1-203ENST00000442679 SPRR2DP22532 72 aa4.55□□□□□ -1.68
USP1-203ENST00000442679 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
USP1-203ENST00000442679 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
USP1-203ENST00000442679 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
USP1-203ENST00000442679 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
USP1-203ENST00000442679 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
USP1-203ENST00000442679 MT1GP13640 62 aa4.41□□□□□ -1.7
USP1-203ENST00000442679 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
USP1-203ENST00000442679 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
USP1-203ENST00000442679 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
USP1-203ENST00000442679 ROMO1P60602 79 aa4.4□□□□□ -1.71
USP1-203ENST00000442679 MT1LQ93083 61 aa4.4□□□□□ -1.71
USP1-203ENST00000442679 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
USP1-203ENST00000442679 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
USP1-203ENST00000442679 MT1MQ8N339 61 aa4.33□□□□□ -1.72
USP1-203ENST00000442679 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
USP1-203ENST00000442679 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
USP1-203ENST00000442679 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
USP1-203ENST00000442679 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
USP1-203ENST00000442679 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
USP1-203ENST00000442679 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
USP1-203ENST00000442679 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
USP1-203ENST00000442679 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
USP1-203ENST00000442679 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
USP1-203ENST00000442679 MT4P47944 62 aa3.97□□□□□ -1.77
USP1-203ENST00000442679 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
USP1-203ENST00000442679 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
USP1-203ENST00000442679 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
USP1-203ENST00000442679 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
USP1-203ENST00000442679 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
USP1-203ENST00000442679 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
USP1-203ENST00000442679 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
USP1-203ENST00000442679 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
USP1-203ENST00000442679 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
USP1-203ENST00000442679 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
USP1-203ENST00000442679 MT1AP04731 61 aa3.74□□□□□ -1.81
USP1-203ENST00000442679 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
USP1-203ENST00000442679 MT3P25713 68 aa3.63□□□□□ -1.83
USP1-203ENST00000442679 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
USP1-203ENST00000442679 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
USP1-203ENST00000442679 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
USP1-203ENST00000442679 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
USP1-203ENST00000442679 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
USP1-203ENST00000442679 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
USP1-203ENST00000442679 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
USP1-203ENST00000442679 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
USP1-203ENST00000442679 INE1O15225 51 aa3.19□□□□□ -1.9
USP1-203ENST00000442679 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
USP1-203ENST00000442679 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
USP1-203ENST00000442679 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
USP1-203ENST00000442679 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
USP1-203ENST00000442679 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
USP1-203ENST00000442679 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
USP1-203ENST00000442679 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
USP1-203ENST00000442679 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
USP1-203ENST00000442679 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
USP1-203ENST00000442679 PRM1P04553 51 aa2.25□□□□□ -2.05
USP1-203ENST00000442679 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
USP1-203ENST00000442679 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
USP1-203ENST00000442679 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
USP1-203ENST00000442679 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms