RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
CSNK1E-210ENST00000442216 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
CSNK1E-210ENST00000442216 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
CSNK1E-210ENST00000442216 MT1GP13640 62 aa5.42□□□□□ -1.54
CSNK1E-210ENST00000442216 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
CSNK1E-210ENST00000442216 MT1LQ93083 61 aa5.37□□□□□ -1.55
CSNK1E-210ENST00000442216 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
CSNK1E-210ENST00000442216 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
CSNK1E-210ENST00000442216 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CSNK1E-210ENST00000442216 MT1MQ8N339 61 aa5.29□□□□□ -1.56
CSNK1E-210ENST00000442216 ROMO1P60602 79 aa5.23□□□□□ -1.57
CSNK1E-210ENST00000442216 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
CSNK1E-210ENST00000442216 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
CSNK1E-210ENST00000442216 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
CSNK1E-210ENST00000442216 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
CSNK1E-210ENST00000442216 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CSNK1E-210ENST00000442216 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
CSNK1E-210ENST00000442216 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
CSNK1E-210ENST00000442216 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
CSNK1E-210ENST00000442216 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
CSNK1E-210ENST00000442216 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
CSNK1E-210ENST00000442216 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
CSNK1E-210ENST00000442216 MT4P47944 62 aa4.86□□□□□ -1.63
CSNK1E-210ENST00000442216 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
CSNK1E-210ENST00000442216 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
CSNK1E-210ENST00000442216 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
CSNK1E-210ENST00000442216 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
CSNK1E-210ENST00000442216 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
CSNK1E-210ENST00000442216 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
CSNK1E-210ENST00000442216 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.67
CSNK1E-210ENST00000442216 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
CSNK1E-210ENST00000442216 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
CSNK1E-210ENST00000442216 MT1AP04731 61 aa4.59□□□□□ -1.67
CSNK1E-210ENST00000442216 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
CSNK1E-210ENST00000442216 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
CSNK1E-210ENST00000442216 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
CSNK1E-210ENST00000442216 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
CSNK1E-210ENST00000442216 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
CSNK1E-210ENST00000442216 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
CSNK1E-210ENST00000442216 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
CSNK1E-210ENST00000442216 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
CSNK1E-210ENST00000442216 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
CSNK1E-210ENST00000442216 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
CSNK1E-210ENST00000442216 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
CSNK1E-210ENST00000442216 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
CSNK1E-210ENST00000442216 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
CSNK1E-210ENST00000442216 MT3P25713 68 aa4.2□□□□□ -1.74
CSNK1E-210ENST00000442216 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
CSNK1E-210ENST00000442216 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
CSNK1E-210ENST00000442216 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
CSNK1E-210ENST00000442216 H3BS24 57 aa4.01□□□□□ -1.77
CSNK1E-210ENST00000442216 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
CSNK1E-210ENST00000442216 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CSNK1E-210ENST00000442216 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
CSNK1E-210ENST00000442216 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CSNK1E-210ENST00000442216 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
CSNK1E-210ENST00000442216 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
CSNK1E-210ENST00000442216 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
CSNK1E-210ENST00000442216 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
CSNK1E-210ENST00000442216 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
CSNK1E-210ENST00000442216 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
CSNK1E-210ENST00000442216 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
CSNK1E-210ENST00000442216 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CSNK1E-210ENST00000442216 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
CSNK1E-210ENST00000442216 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
CSNK1E-210ENST00000442216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
CSNK1E-210ENST00000442216 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
CSNK1E-210ENST00000442216 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
CSNK1E-210ENST00000442216 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CSNK1E-210ENST00000442216 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
CSNK1E-210ENST00000442216 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
CSNK1E-210ENST00000442216 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
CSNK1E-210ENST00000442216 PRM1P04553 51 aa2.66□□□□□ -1.98
CSNK1E-210ENST00000442216 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
CSNK1E-210ENST00000442216 INE1O15225 51 aa2.63□□□□□ -1.99
CSNK1E-210ENST00000442216 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
CSNK1E-210ENST00000442216 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CSNK1E-210ENST00000442216 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 7.3 ms