RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
SEMA3B-207ENST00000441915 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
SEMA3B-207ENST00000441915 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
SEMA3B-207ENST00000441915 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
SEMA3B-207ENST00000441915 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
SEMA3B-207ENST00000441915 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
SEMA3B-207ENST00000441915 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
SEMA3B-207ENST00000441915 MT1GP13640 62 aa5.32□□□□□ -1.56
SEMA3B-207ENST00000441915 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
SEMA3B-207ENST00000441915 MT1MQ8N339 61 aa5.32□□□□□ -1.56
SEMA3B-207ENST00000441915 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
SEMA3B-207ENST00000441915 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
SEMA3B-207ENST00000441915 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
SEMA3B-207ENST00000441915 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
SEMA3B-207ENST00000441915 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
SEMA3B-207ENST00000441915 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
SEMA3B-207ENST00000441915 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
SEMA3B-207ENST00000441915 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.61
SEMA3B-207ENST00000441915 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
SEMA3B-207ENST00000441915 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
SEMA3B-207ENST00000441915 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
SEMA3B-207ENST00000441915 MT1AP04731 61 aa4.82□□□□□ -1.64
SEMA3B-207ENST00000441915 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
SEMA3B-207ENST00000441915 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
SEMA3B-207ENST00000441915 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
SEMA3B-207ENST00000441915 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
SEMA3B-207ENST00000441915 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
SEMA3B-207ENST00000441915 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
SEMA3B-207ENST00000441915 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
SEMA3B-207ENST00000441915 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.66
SEMA3B-207ENST00000441915 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
SEMA3B-207ENST00000441915 SPRR2EP22531 72 aa4.62□□□□□ -1.67
SEMA3B-207ENST00000441915 SPRR2BP35325 72 aa4.62□□□□□ -1.67
SEMA3B-207ENST00000441915 SPRR2AP35326 72 aa4.62□□□□□ -1.67
SEMA3B-207ENST00000441915 PRM1P04553 51 aa4.54□□□□□ -1.68
SEMA3B-207ENST00000441915 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
SEMA3B-207ENST00000441915 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
SEMA3B-207ENST00000441915 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
SEMA3B-207ENST00000441915 SPRR2DP22532 72 aa4.43□□□□□ -1.7
SEMA3B-207ENST00000441915 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
SEMA3B-207ENST00000441915 MT3P25713 68 aa4.32□□□□□ -1.72
SEMA3B-207ENST00000441915 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
SEMA3B-207ENST00000441915 NEBP20929 6669 aa4.23□□□□□ -1.73
SEMA3B-207ENST00000441915 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
SEMA3B-207ENST00000441915 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
SEMA3B-207ENST00000441915 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
SEMA3B-207ENST00000441915 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
SEMA3B-207ENST00000441915 MT4P47944 62 aa3.89□□□□□ -1.79
SEMA3B-207ENST00000441915 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
SEMA3B-207ENST00000441915 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
SEMA3B-207ENST00000441915 LCE4AQ5TA78 99 aa3.84□□□□□ -1.8
SEMA3B-207ENST00000441915 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.8
SEMA3B-207ENST00000441915 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
SEMA3B-207ENST00000441915 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
SEMA3B-207ENST00000441915 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
SEMA3B-207ENST00000441915 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
SEMA3B-207ENST00000441915 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
SEMA3B-207ENST00000441915 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SEMA3B-207ENST00000441915 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
SEMA3B-207ENST00000441915 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SEMA3B-207ENST00000441915 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SEMA3B-207ENST00000441915 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
SEMA3B-207ENST00000441915 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
SEMA3B-207ENST00000441915 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
SEMA3B-207ENST00000441915 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
SEMA3B-207ENST00000441915 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
SEMA3B-207ENST00000441915 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
SEMA3B-207ENST00000441915 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
SEMA3B-207ENST00000441915 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
SEMA3B-207ENST00000441915 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
SEMA3B-207ENST00000441915 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SEMA3B-207ENST00000441915 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SEMA3B-207ENST00000441915 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SEMA3B-207ENST00000441915 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
SEMA3B-207ENST00000441915 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
SEMA3B-207ENST00000441915 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SEMA3B-207ENST00000441915 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SEMA3B-207ENST00000441915 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms