RNA–Protein interactions for RNA: ENST00000441896.1

TNRC18P3-201, Transcript of trinucleotide repeat containing 18 pseudogene 3, humanhuman

BASIC

Gene TNRC18P3, Length 2,691 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P3-201ENST00000441896 KRTAP9-6A0A140TA67 174 aa5.9□□□□□ -1.47
TNRC18P3-201ENST00000441896 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
TNRC18P3-201ENST00000441896 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
TNRC18P3-201ENST00000441896 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
TNRC18P3-201ENST00000441896 MT1LQ93083 61 aa5.65□□□□□ -1.51
TNRC18P3-201ENST00000441896 MT1EP04732 61 aa5.64□□□□□ -1.51
TNRC18P3-201ENST00000441896 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
TNRC18P3-201ENST00000441896 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
TNRC18P3-201ENST00000441896 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
TNRC18P3-201ENST00000441896 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
TNRC18P3-201ENST00000441896 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
TNRC18P3-201ENST00000441896 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
TNRC18P3-201ENST00000441896 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
TNRC18P3-201ENST00000441896 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
TNRC18P3-201ENST00000441896 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
TNRC18P3-201ENST00000441896 MT1GP13640 62 aa5.39□□□□□ -1.55
TNRC18P3-201ENST00000441896 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
TNRC18P3-201ENST00000441896 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
TNRC18P3-201ENST00000441896 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
TNRC18P3-201ENST00000441896 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
TNRC18P3-201ENST00000441896 MT1MQ8N339 61 aa5.31□□□□□ -1.56
TNRC18P3-201ENST00000441896 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
TNRC18P3-201ENST00000441896 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
TNRC18P3-201ENST00000441896 SPRR2EP22531 72 aa5.27□□□□□ -1.57
TNRC18P3-201ENST00000441896 SPRR2BP35325 72 aa5.27□□□□□ -1.57
TNRC18P3-201ENST00000441896 SPRR2AP35326 72 aa5.27□□□□□ -1.57
TNRC18P3-201ENST00000441896 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.57
TNRC18P3-201ENST00000441896 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
TNRC18P3-201ENST00000441896 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
TNRC18P3-201ENST00000441896 PRM1P04553 51 aa5.1□□□□□ -1.59
TNRC18P3-201ENST00000441896 SPRR2DP22532 72 aa5.06□□□□□ -1.6
TNRC18P3-201ENST00000441896 NEBP20929 6669 aa5.05□□□□□ -1.6
TNRC18P3-201ENST00000441896 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
TNRC18P3-201ENST00000441896 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
TNRC18P3-201ENST00000441896 MT1AP04731 61 aa5□□□□□ -1.61
TNRC18P3-201ENST00000441896 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
TNRC18P3-201ENST00000441896 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
TNRC18P3-201ENST00000441896 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
TNRC18P3-201ENST00000441896 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
TNRC18P3-201ENST00000441896 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
TNRC18P3-201ENST00000441896 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
TNRC18P3-201ENST00000441896 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
TNRC18P3-201ENST00000441896 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
TNRC18P3-201ENST00000441896 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
TNRC18P3-201ENST00000441896 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
TNRC18P3-201ENST00000441896 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
TNRC18P3-201ENST00000441896 MT4P47944 62 aa4.44□□□□□ -1.7
TNRC18P3-201ENST00000441896 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
TNRC18P3-201ENST00000441896 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
TNRC18P3-201ENST00000441896 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
TNRC18P3-201ENST00000441896 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.73
TNRC18P3-201ENST00000441896 MT3P25713 68 aa4.24□□□□□ -1.73
TNRC18P3-201ENST00000441896 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
TNRC18P3-201ENST00000441896 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
TNRC18P3-201ENST00000441896 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
TNRC18P3-201ENST00000441896 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
TNRC18P3-201ENST00000441896 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
TNRC18P3-201ENST00000441896 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
TNRC18P3-201ENST00000441896 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
TNRC18P3-201ENST00000441896 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
TNRC18P3-201ENST00000441896 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
TNRC18P3-201ENST00000441896 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
TNRC18P3-201ENST00000441896 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
TNRC18P3-201ENST00000441896 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
TNRC18P3-201ENST00000441896 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
TNRC18P3-201ENST00000441896 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
TNRC18P3-201ENST00000441896 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
TNRC18P3-201ENST00000441896 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
TNRC18P3-201ENST00000441896 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TNRC18P3-201ENST00000441896 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
TNRC18P3-201ENST00000441896 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
TNRC18P3-201ENST00000441896 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
TNRC18P3-201ENST00000441896 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
TNRC18P3-201ENST00000441896 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
TNRC18P3-201ENST00000441896 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
TNRC18P3-201ENST00000441896 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
TNRC18P3-201ENST00000441896 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 180.1 ms