RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 MT1LQ93083 61 aa5.59□□□□□ -1.51
PMS1-213ENST00000441310 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
PMS1-213ENST00000441310 LCE2DQ5TA82 110 aaPredicted RBP5.52□□□□□ -1.53
PMS1-213ENST00000441310 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
PMS1-213ENST00000441310 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.53
PMS1-213ENST00000441310 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
PMS1-213ENST00000441310 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
PMS1-213ENST00000441310 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
PMS1-213ENST00000441310 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
PMS1-213ENST00000441310 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
PMS1-213ENST00000441310 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
PMS1-213ENST00000441310 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
PMS1-213ENST00000441310 MT1GP13640 62 aa5.31□□□□□ -1.56
PMS1-213ENST00000441310 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
PMS1-213ENST00000441310 MT1MQ8N339 61 aa5.29□□□□□ -1.56
PMS1-213ENST00000441310 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
PMS1-213ENST00000441310 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
PMS1-213ENST00000441310 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
PMS1-213ENST00000441310 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
PMS1-213ENST00000441310 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
PMS1-213ENST00000441310 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
PMS1-213ENST00000441310 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
PMS1-213ENST00000441310 PRM1P04553 51 aa4.99□□□□□ -1.61
PMS1-213ENST00000441310 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
PMS1-213ENST00000441310 SPRR2EP22531 72 aa4.94□□□□□ -1.62
PMS1-213ENST00000441310 SPRR2BP35325 72 aa4.94□□□□□ -1.62
PMS1-213ENST00000441310 SPRR2AP35326 72 aa4.94□□□□□ -1.62
PMS1-213ENST00000441310 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
PMS1-213ENST00000441310 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
PMS1-213ENST00000441310 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
PMS1-213ENST00000441310 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
PMS1-213ENST00000441310 MT1AP04731 61 aa4.8□□□□□ -1.64
PMS1-213ENST00000441310 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
PMS1-213ENST00000441310 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
PMS1-213ENST00000441310 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
PMS1-213ENST00000441310 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
PMS1-213ENST00000441310 SPRR2DP22532 72 aa4.71□□□□□ -1.66
PMS1-213ENST00000441310 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
PMS1-213ENST00000441310 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
PMS1-213ENST00000441310 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
PMS1-213ENST00000441310 NEBP20929 6669 aa4.38□□□□□ -1.71
PMS1-213ENST00000441310 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
PMS1-213ENST00000441310 MT4P47944 62 aa4.25□□□□□ -1.73
PMS1-213ENST00000441310 MT3P25713 68 aa4.22□□□□□ -1.73
PMS1-213ENST00000441310 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
PMS1-213ENST00000441310 MUC19Q7Z5P9 8384 aa4.2□□□□□ -1.74
PMS1-213ENST00000441310 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
PMS1-213ENST00000441310 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
PMS1-213ENST00000441310 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
PMS1-213ENST00000441310 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
PMS1-213ENST00000441310 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
PMS1-213ENST00000441310 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
PMS1-213ENST00000441310 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
PMS1-213ENST00000441310 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
PMS1-213ENST00000441310 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
PMS1-213ENST00000441310 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
PMS1-213ENST00000441310 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
PMS1-213ENST00000441310 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
PMS1-213ENST00000441310 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
PMS1-213ENST00000441310 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
PMS1-213ENST00000441310 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
PMS1-213ENST00000441310 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
PMS1-213ENST00000441310 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
PMS1-213ENST00000441310 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
PMS1-213ENST00000441310 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
PMS1-213ENST00000441310 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
PMS1-213ENST00000441310 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
PMS1-213ENST00000441310 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
PMS1-213ENST00000441310 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
PMS1-213ENST00000441310 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
PMS1-213ENST00000441310 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
PMS1-213ENST00000441310 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
PMS1-213ENST00000441310 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
PMS1-213ENST00000441310 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
PMS1-213ENST00000441310 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
PMS1-213ENST00000441310 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
PMS1-213ENST00000441310 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 119.7 ms