RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
SMPD4-210ENST00000441135 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
SMPD4-210ENST00000441135 MT1GP13640 62 aa6.56□□□□□ -1.36
SMPD4-210ENST00000441135 A6NED7 52 aa6.55□□□□□ -1.36
SMPD4-210ENST00000441135 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
SMPD4-210ENST00000441135 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
SMPD4-210ENST00000441135 MT1LQ93083 61 aa6.49□□□□□ -1.37
SMPD4-210ENST00000441135 MT1MQ8N339 61 aa6.44□□□□□ -1.38
SMPD4-210ENST00000441135 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
SMPD4-210ENST00000441135 GPR98Q8WXG9 6306 aa6.42□□□□□ -1.38
SMPD4-210ENST00000441135 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
SMPD4-210ENST00000441135 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
SMPD4-210ENST00000441135 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
SMPD4-210ENST00000441135 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
SMPD4-210ENST00000441135 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
SMPD4-210ENST00000441135 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
SMPD4-210ENST00000441135 ROMO1P60602 79 aa6.23□□□□□ -1.41
SMPD4-210ENST00000441135 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.41
SMPD4-210ENST00000441135 MT4P47944 62 aa6.21□□□□□ -1.42
SMPD4-210ENST00000441135 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
SMPD4-210ENST00000441135 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
SMPD4-210ENST00000441135 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
SMPD4-210ENST00000441135 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
SMPD4-210ENST00000441135 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
SMPD4-210ENST00000441135 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
SMPD4-210ENST00000441135 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
SMPD4-210ENST00000441135 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
SMPD4-210ENST00000441135 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
SMPD4-210ENST00000441135 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
SMPD4-210ENST00000441135 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
SMPD4-210ENST00000441135 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
SMPD4-210ENST00000441135 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
SMPD4-210ENST00000441135 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
SMPD4-210ENST00000441135 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
SMPD4-210ENST00000441135 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
SMPD4-210ENST00000441135 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
SMPD4-210ENST00000441135 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SMPD4-210ENST00000441135 MT1AP04731 61 aa5.55□□□□□ -1.52
SMPD4-210ENST00000441135 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
SMPD4-210ENST00000441135 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
SMPD4-210ENST00000441135 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
SMPD4-210ENST00000441135 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
SMPD4-210ENST00000441135 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
SMPD4-210ENST00000441135 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
SMPD4-210ENST00000441135 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
SMPD4-210ENST00000441135 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
SMPD4-210ENST00000441135 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
SMPD4-210ENST00000441135 MT3P25713 68 aa5.07□□□□□ -1.6
SMPD4-210ENST00000441135 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
SMPD4-210ENST00000441135 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
SMPD4-210ENST00000441135 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
SMPD4-210ENST00000441135 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
SMPD4-210ENST00000441135 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
SMPD4-210ENST00000441135 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
SMPD4-210ENST00000441135 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
SMPD4-210ENST00000441135 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
SMPD4-210ENST00000441135 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
SMPD4-210ENST00000441135 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
SMPD4-210ENST00000441135 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
SMPD4-210ENST00000441135 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
SMPD4-210ENST00000441135 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
SMPD4-210ENST00000441135 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
SMPD4-210ENST00000441135 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
SMPD4-210ENST00000441135 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
SMPD4-210ENST00000441135 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
SMPD4-210ENST00000441135 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
SMPD4-210ENST00000441135 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
SMPD4-210ENST00000441135 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
SMPD4-210ENST00000441135 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
SMPD4-210ENST00000441135 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
SMPD4-210ENST00000441135 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SMPD4-210ENST00000441135 H3BS24 57 aa3.21□□□□□ -1.9
SMPD4-210ENST00000441135 PRM1P04553 51 aa3.16□□□□□ -1.9
SMPD4-210ENST00000441135 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
SMPD4-210ENST00000441135 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
SMPD4-210ENST00000441135 INE1O15225 51 aa3.06□□□□□ -1.92
SMPD4-210ENST00000441135 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
SMPD4-210ENST00000441135 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 90.7 ms