RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
SATB2-204ENST00000440919 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
SATB2-204ENST00000440919 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
SATB2-204ENST00000440919 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
SATB2-204ENST00000440919 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
SATB2-204ENST00000440919 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
SATB2-204ENST00000440919 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
SATB2-204ENST00000440919 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.5
SATB2-204ENST00000440919 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
SATB2-204ENST00000440919 MT1GP13640 62 aa5.67□□□□□ -1.5
SATB2-204ENST00000440919 MT1MQ8N339 61 aa5.67□□□□□ -1.5
SATB2-204ENST00000440919 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
SATB2-204ENST00000440919 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
SATB2-204ENST00000440919 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
SATB2-204ENST00000440919 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
SATB2-204ENST00000440919 KRTAP5-9P26371 169 aa5.49□□□□□ -1.53
SATB2-204ENST00000440919 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
SATB2-204ENST00000440919 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
SATB2-204ENST00000440919 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
SATB2-204ENST00000440919 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
SATB2-204ENST00000440919 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
SATB2-204ENST00000440919 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
SATB2-204ENST00000440919 SPRR2EP22531 72 aa5.3□□□□□ -1.56
SATB2-204ENST00000440919 SPRR2BP35325 72 aa5.3□□□□□ -1.56
SATB2-204ENST00000440919 SPRR2AP35326 72 aa5.3□□□□□ -1.56
SATB2-204ENST00000440919 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
SATB2-204ENST00000440919 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
SATB2-204ENST00000440919 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
SATB2-204ENST00000440919 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
SATB2-204ENST00000440919 MT1AP04731 61 aa5.15□□□□□ -1.59
SATB2-204ENST00000440919 SPRR2DP22532 72 aa5.09□□□□□ -1.59
SATB2-204ENST00000440919 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
SATB2-204ENST00000440919 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
SATB2-204ENST00000440919 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
SATB2-204ENST00000440919 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
SATB2-204ENST00000440919 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
SATB2-204ENST00000440919 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
SATB2-204ENST00000440919 NEBP20929 6669 aa4.89□□□□□ -1.63
SATB2-204ENST00000440919 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SATB2-204ENST00000440919 PRM1P04553 51 aa4.75□□□□□ -1.65
SATB2-204ENST00000440919 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
SATB2-204ENST00000440919 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
SATB2-204ENST00000440919 MT3P25713 68 aa4.57□□□□□ -1.68
SATB2-204ENST00000440919 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
SATB2-204ENST00000440919 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SATB2-204ENST00000440919 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
SATB2-204ENST00000440919 MT4P47944 62 aa4.43□□□□□ -1.7
SATB2-204ENST00000440919 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
SATB2-204ENST00000440919 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.72
SATB2-204ENST00000440919 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
SATB2-204ENST00000440919 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
SATB2-204ENST00000440919 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
SATB2-204ENST00000440919 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
SATB2-204ENST00000440919 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
SATB2-204ENST00000440919 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
SATB2-204ENST00000440919 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
SATB2-204ENST00000440919 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SATB2-204ENST00000440919 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SATB2-204ENST00000440919 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SATB2-204ENST00000440919 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
SATB2-204ENST00000440919 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
SATB2-204ENST00000440919 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
SATB2-204ENST00000440919 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
SATB2-204ENST00000440919 LCE1CQ5T751 118 aa3.59□□□□□ -1.84
SATB2-204ENST00000440919 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
SATB2-204ENST00000440919 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
SATB2-204ENST00000440919 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
SATB2-204ENST00000440919 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
SATB2-204ENST00000440919 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
SATB2-204ENST00000440919 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SATB2-204ENST00000440919 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SATB2-204ENST00000440919 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
SATB2-204ENST00000440919 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
SATB2-204ENST00000440919 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
SATB2-204ENST00000440919 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
SATB2-204ENST00000440919 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SATB2-204ENST00000440919 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
SATB2-204ENST00000440919 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 342 ms