RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
LTBR-202ENST00000440421 MT1MQ8N339 61 aa4.86□□□□□ -1.63
LTBR-202ENST00000440421 PSPHP1O15172 72 aa4.83□□□□□ -1.64
LTBR-202ENST00000440421 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
LTBR-202ENST00000440421 V9GYY9 64 aa4.81□□□□□ -1.64
LTBR-202ENST00000440421 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
LTBR-202ENST00000440421 Q1T7F1 81 aa4.78□□□□□ -1.64
LTBR-202ENST00000440421 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
LTBR-202ENST00000440421 K7ERS5 55 aa4.77□□□□□ -1.65
LTBR-202ENST00000440421 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
LTBR-202ENST00000440421 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
LTBR-202ENST00000440421 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
LTBR-202ENST00000440421 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
LTBR-202ENST00000440421 A6NED7 52 aa4.66□□□□□ -1.66
LTBR-202ENST00000440421 LCE4AQ5TA78 99 aa4.66□□□□□ -1.66
LTBR-202ENST00000440421 MT4P47944 62 aa4.65□□□□□ -1.67
LTBR-202ENST00000440421 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
LTBR-202ENST00000440421 RPS28P62857 69 aaKnown RBP4.55□□□□□ -1.68
LTBR-202ENST00000440421 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
LTBR-202ENST00000440421 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
LTBR-202ENST00000440421 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
LTBR-202ENST00000440421 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
LTBR-202ENST00000440421 GPR98Q8WXG9 6306 aa4.5□□□□□ -1.69
LTBR-202ENST00000440421 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
LTBR-202ENST00000440421 ROMO1P60602 79 aa4.46□□□□□ -1.7
LTBR-202ENST00000440421 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
LTBR-202ENST00000440421 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
LTBR-202ENST00000440421 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
LTBR-202ENST00000440421 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
LTBR-202ENST00000440421 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
LTBR-202ENST00000440421 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
LTBR-202ENST00000440421 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
LTBR-202ENST00000440421 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
LTBR-202ENST00000440421 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
LTBR-202ENST00000440421 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
LTBR-202ENST00000440421 MT1AP04731 61 aa4.16□□□□□ -1.74
LTBR-202ENST00000440421 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
LTBR-202ENST00000440421 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
LTBR-202ENST00000440421 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
LTBR-202ENST00000440421 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
LTBR-202ENST00000440421 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
LTBR-202ENST00000440421 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
LTBR-202ENST00000440421 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
LTBR-202ENST00000440421 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
LTBR-202ENST00000440421 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
LTBR-202ENST00000440421 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
LTBR-202ENST00000440421 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
LTBR-202ENST00000440421 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
LTBR-202ENST00000440421 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
LTBR-202ENST00000440421 MT3P25713 68 aa3.8□□□□□ -1.8
LTBR-202ENST00000440421 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
LTBR-202ENST00000440421 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
LTBR-202ENST00000440421 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
LTBR-202ENST00000440421 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
LTBR-202ENST00000440421 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
LTBR-202ENST00000440421 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
LTBR-202ENST00000440421 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
LTBR-202ENST00000440421 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
LTBR-202ENST00000440421 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
LTBR-202ENST00000440421 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
LTBR-202ENST00000440421 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
LTBR-202ENST00000440421 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
LTBR-202ENST00000440421 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
LTBR-202ENST00000440421 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
LTBR-202ENST00000440421 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
LTBR-202ENST00000440421 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
LTBR-202ENST00000440421 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
LTBR-202ENST00000440421 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
LTBR-202ENST00000440421 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
LTBR-202ENST00000440421 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
LTBR-202ENST00000440421 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
LTBR-202ENST00000440421 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
LTBR-202ENST00000440421 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
LTBR-202ENST00000440421 INE1O15225 51 aa2.35□□□□□ -2.03
LTBR-202ENST00000440421 PRM1P04553 51 aa2.3□□□□□ -2.04
LTBR-202ENST00000440421 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
LTBR-202ENST00000440421 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
LTBR-202ENST00000440421 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 111.6 ms