RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
ACSM3-202ENST00000440284 KRTAP8-1Q8IUC2 63 aa4.07□□□□□ -1.76
ACSM3-202ENST00000440284 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
ACSM3-202ENST00000440284 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
ACSM3-202ENST00000440284 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
ACSM3-202ENST00000440284 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
ACSM3-202ENST00000440284 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
ACSM3-202ENST00000440284 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
ACSM3-202ENST00000440284 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
ACSM3-202ENST00000440284 USH2AO75445 5202 aa3.93□□□□□ -1.78
ACSM3-202ENST00000440284 MT3P25713 68 aa3.88□□□□□ -1.79
ACSM3-202ENST00000440284 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
ACSM3-202ENST00000440284 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
ACSM3-202ENST00000440284 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
ACSM3-202ENST00000440284 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
ACSM3-202ENST00000440284 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
ACSM3-202ENST00000440284 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
ACSM3-202ENST00000440284 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
ACSM3-202ENST00000440284 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
ACSM3-202ENST00000440284 KMT2DO14686 5537 aa3.66□□□□□ -1.82
ACSM3-202ENST00000440284 MT1EP04732 61 aa3.65□□□□□ -1.83
ACSM3-202ENST00000440284 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
ACSM3-202ENST00000440284 MT1LQ93083 61 aa3.6□□□□□ -1.83
ACSM3-202ENST00000440284 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
ACSM3-202ENST00000440284 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
ACSM3-202ENST00000440284 MT1GP13640 62 aa3.48□□□□□ -1.85
ACSM3-202ENST00000440284 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
ACSM3-202ENST00000440284 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
ACSM3-202ENST00000440284 INE1O15225 51 aa3.42□□□□□ -1.86
ACSM3-202ENST00000440284 MT1MQ8N339 61 aa3.42□□□□□ -1.86
ACSM3-202ENST00000440284 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.86
ACSM3-202ENST00000440284 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
ACSM3-202ENST00000440284 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
ACSM3-202ENST00000440284 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
ACSM3-202ENST00000440284 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
ACSM3-202ENST00000440284 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
ACSM3-202ENST00000440284 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
ACSM3-202ENST00000440284 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
ACSM3-202ENST00000440284 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
ACSM3-202ENST00000440284 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
ACSM3-202ENST00000440284 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
ACSM3-202ENST00000440284 SPRR2EP22531 72 aa3.19□□□□□ -1.9
ACSM3-202ENST00000440284 SPRR2BP35325 72 aa3.19□□□□□ -1.9
ACSM3-202ENST00000440284 SPRR2AP35326 72 aa3.19□□□□□ -1.9
ACSM3-202ENST00000440284 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
ACSM3-202ENST00000440284 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
ACSM3-202ENST00000440284 MT1AP04731 61 aa3.09□□□□□ -1.92
ACSM3-202ENST00000440284 SPRR2DP22532 72 aa3.08□□□□□ -1.92
ACSM3-202ENST00000440284 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
ACSM3-202ENST00000440284 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
ACSM3-202ENST00000440284 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
ACSM3-202ENST00000440284 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
ACSM3-202ENST00000440284 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
ACSM3-202ENST00000440284 NEBP20929 6669 aa2.96□□□□□ -1.94
ACSM3-202ENST00000440284 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
ACSM3-202ENST00000440284 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
ACSM3-202ENST00000440284 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
ACSM3-202ENST00000440284 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
ACSM3-202ENST00000440284 MT4P47944 62 aa2.63□□□□□ -1.99
ACSM3-202ENST00000440284 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
ACSM3-202ENST00000440284 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
ACSM3-202ENST00000440284 PRM1P04553 51 aa2.52□□□□□ -2.01
ACSM3-202ENST00000440284 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
ACSM3-202ENST00000440284 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
ACSM3-202ENST00000440284 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
ACSM3-202ENST00000440284 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
ACSM3-202ENST00000440284 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
ACSM3-202ENST00000440284 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
ACSM3-202ENST00000440284 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
ACSM3-202ENST00000440284 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
ACSM3-202ENST00000440284 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
ACSM3-202ENST00000440284 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.09
ACSM3-202ENST00000440284 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
ACSM3-202ENST00000440284 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
ACSM3-202ENST00000440284 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
ACSM3-202ENST00000440284 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
ACSM3-202ENST00000440284 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 155.8 ms