RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
SNRPD3-204ENST00000439775 MT4P47944 62 aa5.64□□□□□ -1.51
SNRPD3-204ENST00000439775 CCDC179H3BU77 68 aa5.63□□□□□ -1.51
SNRPD3-204ENST00000439775 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
SNRPD3-204ENST00000439775 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
SNRPD3-204ENST00000439775 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
SNRPD3-204ENST00000439775 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
SNRPD3-204ENST00000439775 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
SNRPD3-204ENST00000439775 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
SNRPD3-204ENST00000439775 UQCR11O14957 56 aa5.49□□□□□ -1.53
SNRPD3-204ENST00000439775 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
SNRPD3-204ENST00000439775 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
SNRPD3-204ENST00000439775 TMEM258P61165 79 aa5.45□□□□□ -1.54
SNRPD3-204ENST00000439775 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
SNRPD3-204ENST00000439775 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
SNRPD3-204ENST00000439775 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
SNRPD3-204ENST00000439775 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
SNRPD3-204ENST00000439775 V9GYY9 64 aa5.38□□□□□ -1.55
SNRPD3-204ENST00000439775 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
SNRPD3-204ENST00000439775 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
SNRPD3-204ENST00000439775 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
SNRPD3-204ENST00000439775 K7ERS5 55 aa5.27□□□□□ -1.57
SNRPD3-204ENST00000439775 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
SNRPD3-204ENST00000439775 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SNRPD3-204ENST00000439775 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
SNRPD3-204ENST00000439775 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
SNRPD3-204ENST00000439775 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
SNRPD3-204ENST00000439775 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
SNRPD3-204ENST00000439775 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SNRPD3-204ENST00000439775 PSPHP1O15172 72 aa5.15□□□□□ -1.59
SNRPD3-204ENST00000439775 Q1T7F1 81 aa5.13□□□□□ -1.59
SNRPD3-204ENST00000439775 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
SNRPD3-204ENST00000439775 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
SNRPD3-204ENST00000439775 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
SNRPD3-204ENST00000439775 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
SNRPD3-204ENST00000439775 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
SNRPD3-204ENST00000439775 A6NED7 52 aa4.98□□□□□ -1.61
SNRPD3-204ENST00000439775 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
SNRPD3-204ENST00000439775 MT1AP04731 61 aa4.93□□□□□ -1.62
SNRPD3-204ENST00000439775 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
SNRPD3-204ENST00000439775 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
SNRPD3-204ENST00000439775 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
SNRPD3-204ENST00000439775 ROMO1P60602 79 aa4.88□□□□□ -1.63
SNRPD3-204ENST00000439775 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
SNRPD3-204ENST00000439775 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
SNRPD3-204ENST00000439775 H3BS24 57 aa4.76□□□□□ -1.65
SNRPD3-204ENST00000439775 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
SNRPD3-204ENST00000439775 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
SNRPD3-204ENST00000439775 KRTAP5-8O75690 187 aa4.69□□□□□ -1.66
SNRPD3-204ENST00000439775 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SNRPD3-204ENST00000439775 MT3P25713 68 aa4.51□□□□□ -1.69
SNRPD3-204ENST00000439775 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
SNRPD3-204ENST00000439775 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
SNRPD3-204ENST00000439775 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
SNRPD3-204ENST00000439775 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
SNRPD3-204ENST00000439775 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SNRPD3-204ENST00000439775 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SNRPD3-204ENST00000439775 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
SNRPD3-204ENST00000439775 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
SNRPD3-204ENST00000439775 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
SNRPD3-204ENST00000439775 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
SNRPD3-204ENST00000439775 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
SNRPD3-204ENST00000439775 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
SNRPD3-204ENST00000439775 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
SNRPD3-204ENST00000439775 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
SNRPD3-204ENST00000439775 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
SNRPD3-204ENST00000439775 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SNRPD3-204ENST00000439775 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SNRPD3-204ENST00000439775 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
SNRPD3-204ENST00000439775 INE1O15225 51 aa3.4□□□□□ -1.87
SNRPD3-204ENST00000439775 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SNRPD3-204ENST00000439775 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SNRPD3-204ENST00000439775 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SNRPD3-204ENST00000439775 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SNRPD3-204ENST00000439775 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SNRPD3-204ENST00000439775 PRM1P04553 51 aa2.48□□□□□ -2.01
SNRPD3-204ENST00000439775 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
SNRPD3-204ENST00000439775 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 99.3 ms