RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
CCDC188-201ENST00000439765 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
CCDC188-201ENST00000439765 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
CCDC188-201ENST00000439765 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
CCDC188-201ENST00000439765 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
CCDC188-201ENST00000439765 MT1EP04732 61 aa6.55□□□□□ -1.36
CCDC188-201ENST00000439765 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
CCDC188-201ENST00000439765 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
CCDC188-201ENST00000439765 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
CCDC188-201ENST00000439765 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
CCDC188-201ENST00000439765 KRTAP19-3Q7Z4W3 81 aa6.46□□□□□ -1.38
CCDC188-201ENST00000439765 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
CCDC188-201ENST00000439765 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
CCDC188-201ENST00000439765 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
CCDC188-201ENST00000439765 MT1LQ93083 61 aa6.3□□□□□ -1.4
CCDC188-201ENST00000439765 MT1GP13640 62 aa6.29□□□□□ -1.4
CCDC188-201ENST00000439765 GPR98Q8WXG9 6306 aa6.25□□□□□ -1.41
CCDC188-201ENST00000439765 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
CCDC188-201ENST00000439765 MT1MQ8N339 61 aa6.22□□□□□ -1.41
CCDC188-201ENST00000439765 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
CCDC188-201ENST00000439765 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
CCDC188-201ENST00000439765 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
CCDC188-201ENST00000439765 LCE4AQ5TA78 99 aa6.09□□□□□ -1.44
CCDC188-201ENST00000439765 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
CCDC188-201ENST00000439765 HMCN1Q96RW7 5635 aa6.02□□□□□ -1.45
CCDC188-201ENST00000439765 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
CCDC188-201ENST00000439765 MT4P47944 62 aa5.99□□□□□ -1.45
CCDC188-201ENST00000439765 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
CCDC188-201ENST00000439765 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.47
CCDC188-201ENST00000439765 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
CCDC188-201ENST00000439765 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CCDC188-201ENST00000439765 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
CCDC188-201ENST00000439765 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.49
CCDC188-201ENST00000439765 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
CCDC188-201ENST00000439765 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
CCDC188-201ENST00000439765 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
CCDC188-201ENST00000439765 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
CCDC188-201ENST00000439765 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
CCDC188-201ENST00000439765 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
CCDC188-201ENST00000439765 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
CCDC188-201ENST00000439765 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
CCDC188-201ENST00000439765 MT1AP04731 61 aa5.35□□□□□ -1.55
CCDC188-201ENST00000439765 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
CCDC188-201ENST00000439765 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
CCDC188-201ENST00000439765 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
CCDC188-201ENST00000439765 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
CCDC188-201ENST00000439765 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
CCDC188-201ENST00000439765 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
CCDC188-201ENST00000439765 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
CCDC188-201ENST00000439765 KRTAP5-8O75690 187 aa5□□□□□ -1.61
CCDC188-201ENST00000439765 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
CCDC188-201ENST00000439765 MT3P25713 68 aa4.87□□□□□ -1.63
CCDC188-201ENST00000439765 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
CCDC188-201ENST00000439765 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
CCDC188-201ENST00000439765 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
CCDC188-201ENST00000439765 H3BS24 57 aa4.78□□□□□ -1.64
CCDC188-201ENST00000439765 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
CCDC188-201ENST00000439765 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
CCDC188-201ENST00000439765 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
CCDC188-201ENST00000439765 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CCDC188-201ENST00000439765 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
CCDC188-201ENST00000439765 INE1O15225 51 aa4.33□□□□□ -1.72
CCDC188-201ENST00000439765 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
CCDC188-201ENST00000439765 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
CCDC188-201ENST00000439765 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
CCDC188-201ENST00000439765 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
CCDC188-201ENST00000439765 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
CCDC188-201ENST00000439765 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
CCDC188-201ENST00000439765 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
CCDC188-201ENST00000439765 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
CCDC188-201ENST00000439765 PRM1P04553 51 aa3.5□□□□□ -1.85
CCDC188-201ENST00000439765 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
CCDC188-201ENST00000439765 PHGR1C9JFL3 82 aa3.34□□□□□ -1.88
CCDC188-201ENST00000439765 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CCDC188-201ENST00000439765 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CCDC188-201ENST00000439765 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CCDC188-201ENST00000439765 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 137.8 ms