RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
HSPG2-206ENST00000439717 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
HSPG2-206ENST00000439717 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
HSPG2-206ENST00000439717 MT1GP13640 62 aa4.25□□□□□ -1.73
HSPG2-206ENST00000439717 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
HSPG2-206ENST00000439717 MT1LQ93083 61 aa4.22□□□□□ -1.73
HSPG2-206ENST00000439717 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
HSPG2-206ENST00000439717 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
HSPG2-206ENST00000439717 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
HSPG2-206ENST00000439717 MT1MQ8N339 61 aa4.16□□□□□ -1.74
HSPG2-206ENST00000439717 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
HSPG2-206ENST00000439717 ROMO1P60602 79 aa4.13□□□□□ -1.75
HSPG2-206ENST00000439717 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
HSPG2-206ENST00000439717 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
HSPG2-206ENST00000439717 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
HSPG2-206ENST00000439717 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
HSPG2-206ENST00000439717 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
HSPG2-206ENST00000439717 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
HSPG2-206ENST00000439717 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
HSPG2-206ENST00000439717 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
HSPG2-206ENST00000439717 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
HSPG2-206ENST00000439717 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
HSPG2-206ENST00000439717 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
HSPG2-206ENST00000439717 MT4P47944 62 aa3.82□□□□□ -1.8
HSPG2-206ENST00000439717 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
HSPG2-206ENST00000439717 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
HSPG2-206ENST00000439717 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
HSPG2-206ENST00000439717 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
HSPG2-206ENST00000439717 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
HSPG2-206ENST00000439717 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
HSPG2-206ENST00000439717 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
HSPG2-206ENST00000439717 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
HSPG2-206ENST00000439717 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
HSPG2-206ENST00000439717 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
HSPG2-206ENST00000439717 MT1AP04731 61 aa3.6□□□□□ -1.83
HSPG2-206ENST00000439717 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
HSPG2-206ENST00000439717 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
HSPG2-206ENST00000439717 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
HSPG2-206ENST00000439717 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
HSPG2-206ENST00000439717 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
HSPG2-206ENST00000439717 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
HSPG2-206ENST00000439717 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
HSPG2-206ENST00000439717 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
HSPG2-206ENST00000439717 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
HSPG2-206ENST00000439717 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
HSPG2-206ENST00000439717 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
HSPG2-206ENST00000439717 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
HSPG2-206ENST00000439717 MT3P25713 68 aa3.3□□□□□ -1.88
HSPG2-206ENST00000439717 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
HSPG2-206ENST00000439717 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
HSPG2-206ENST00000439717 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
HSPG2-206ENST00000439717 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
HSPG2-206ENST00000439717 LCE1EQ5T753 118 aa3□□□□□ -1.93
HSPG2-206ENST00000439717 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
HSPG2-206ENST00000439717 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
HSPG2-206ENST00000439717 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
HSPG2-206ENST00000439717 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
HSPG2-206ENST00000439717 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
HSPG2-206ENST00000439717 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
HSPG2-206ENST00000439717 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
HSPG2-206ENST00000439717 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
HSPG2-206ENST00000439717 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
HSPG2-206ENST00000439717 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
HSPG2-206ENST00000439717 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
HSPG2-206ENST00000439717 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
HSPG2-206ENST00000439717 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
HSPG2-206ENST00000439717 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
HSPG2-206ENST00000439717 H3BS24 57 aa2.4□□□□□ -2.03
HSPG2-206ENST00000439717 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
HSPG2-206ENST00000439717 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
HSPG2-206ENST00000439717 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
HSPG2-206ENST00000439717 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
HSPG2-206ENST00000439717 PRM1P04553 51 aa2.11□□□□□ -2.07
HSPG2-206ENST00000439717 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
HSPG2-206ENST00000439717 INE1O15225 51 aa2.08□□□□□ -2.08
HSPG2-206ENST00000439717 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
HSPG2-206ENST00000439717 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
HSPG2-206ENST00000439717 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 117.4 ms