RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
AC011228.1-201ENST00000439027 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
AC011228.1-201ENST00000439027 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
AC011228.1-201ENST00000439027 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
AC011228.1-201ENST00000439027 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
AC011228.1-201ENST00000439027 SPRR2EP22531 72 aa3.86□□□□□ -1.79
AC011228.1-201ENST00000439027 SPRR2BP35325 72 aa3.86□□□□□ -1.79
AC011228.1-201ENST00000439027 SPRR2AP35326 72 aa3.86□□□□□ -1.79
AC011228.1-201ENST00000439027 MT1XP80297 61 aa3.84□□□□□ -1.79
AC011228.1-201ENST00000439027 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
AC011228.1-201ENST00000439027 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
AC011228.1-201ENST00000439027 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
AC011228.1-201ENST00000439027 KRTAP12-2P59991 146 aa3.81□□□□□ -1.8
AC011228.1-201ENST00000439027 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
AC011228.1-201ENST00000439027 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
AC011228.1-201ENST00000439027 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
AC011228.1-201ENST00000439027 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
AC011228.1-201ENST00000439027 K7ERS5 55 aa3.75□□□□□ -1.81
AC011228.1-201ENST00000439027 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
AC011228.1-201ENST00000439027 SPRR2DP22532 72 aa3.73□□□□□ -1.81
AC011228.1-201ENST00000439027 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
AC011228.1-201ENST00000439027 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
AC011228.1-201ENST00000439027 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
AC011228.1-201ENST00000439027 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
AC011228.1-201ENST00000439027 ROMO1P60602 79 aa3.57□□□□□ -1.84
AC011228.1-201ENST00000439027 TNP1P09430 55 aa3.55□□□□□ -1.84
AC011228.1-201ENST00000439027 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
AC011228.1-201ENST00000439027 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
AC011228.1-201ENST00000439027 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
AC011228.1-201ENST00000439027 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
AC011228.1-201ENST00000439027 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
AC011228.1-201ENST00000439027 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
AC011228.1-201ENST00000439027 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
AC011228.1-201ENST00000439027 MT1EP04732 61 aa3.42□□□□□ -1.86
AC011228.1-201ENST00000439027 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
AC011228.1-201ENST00000439027 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
AC011228.1-201ENST00000439027 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
AC011228.1-201ENST00000439027 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
AC011228.1-201ENST00000439027 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
AC011228.1-201ENST00000439027 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
AC011228.1-201ENST00000439027 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
AC011228.1-201ENST00000439027 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
AC011228.1-201ENST00000439027 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
AC011228.1-201ENST00000439027 MT1GP13640 62 aa3.32□□□□□ -1.88
AC011228.1-201ENST00000439027 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
AC011228.1-201ENST00000439027 MT4P47944 62 aa3.29□□□□□ -1.88
AC011228.1-201ENST00000439027 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
AC011228.1-201ENST00000439027 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
AC011228.1-201ENST00000439027 MT1MQ8N339 61 aa3.26□□□□□ -1.89
AC011228.1-201ENST00000439027 MT1LQ93083 61 aa3.24□□□□□ -1.89
AC011228.1-201ENST00000439027 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
AC011228.1-201ENST00000439027 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
AC011228.1-201ENST00000439027 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
AC011228.1-201ENST00000439027 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
AC011228.1-201ENST00000439027 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
AC011228.1-201ENST00000439027 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
AC011228.1-201ENST00000439027 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
AC011228.1-201ENST00000439027 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
AC011228.1-201ENST00000439027 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
AC011228.1-201ENST00000439027 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
AC011228.1-201ENST00000439027 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
AC011228.1-201ENST00000439027 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
AC011228.1-201ENST00000439027 MT1AP04731 61 aa2.76□□□□□ -1.97
AC011228.1-201ENST00000439027 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
AC011228.1-201ENST00000439027 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
AC011228.1-201ENST00000439027 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
AC011228.1-201ENST00000439027 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
AC011228.1-201ENST00000439027 LCE1CQ5T751 118 aa2.55□□□□□ -2
AC011228.1-201ENST00000439027 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
AC011228.1-201ENST00000439027 INE1O15225 51 aa2.53□□□□□ -2
AC011228.1-201ENST00000439027 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
AC011228.1-201ENST00000439027 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
AC011228.1-201ENST00000439027 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
AC011228.1-201ENST00000439027 PRM1P04553 51 aa1.86□□□□□ -2.11
AC011228.1-201ENST00000439027 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
AC011228.1-201ENST00000439027 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
AC011228.1-201ENST00000439027 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 126.6 ms