RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
LINC01088-201ENST00000437737 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
LINC01088-201ENST00000437737 HMCN1Q96RW7 5635 aa5.41□□□□□ -1.54
LINC01088-201ENST00000437737 ROMO1P60602 79 aa5.4□□□□□ -1.54
LINC01088-201ENST00000437737 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
LINC01088-201ENST00000437737 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
LINC01088-201ENST00000437737 AHNAK2Q8IVF2 5795 aa5.37□□□□□ -1.55
LINC01088-201ENST00000437737 TNP1P09430 55 aa5.35□□□□□ -1.55
LINC01088-201ENST00000437737 MT4P47944 62 aa5.33□□□□□ -1.56
LINC01088-201ENST00000437737 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
LINC01088-201ENST00000437737 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
LINC01088-201ENST00000437737 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
LINC01088-201ENST00000437737 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
LINC01088-201ENST00000437737 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
LINC01088-201ENST00000437737 MT1EP04732 61 aa5.25□□□□□ -1.57
LINC01088-201ENST00000437737 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
LINC01088-201ENST00000437737 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
LINC01088-201ENST00000437737 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
LINC01088-201ENST00000437737 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
LINC01088-201ENST00000437737 MT1GP13640 62 aa5.12□□□□□ -1.59
LINC01088-201ENST00000437737 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
LINC01088-201ENST00000437737 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
LINC01088-201ENST00000437737 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
LINC01088-201ENST00000437737 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
LINC01088-201ENST00000437737 MT1MQ8N339 61 aa5.04□□□□□ -1.6
LINC01088-201ENST00000437737 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
LINC01088-201ENST00000437737 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
LINC01088-201ENST00000437737 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
LINC01088-201ENST00000437737 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LINC01088-201ENST00000437737 MT1LQ93083 61 aa4.93□□□□□ -1.62
LINC01088-201ENST00000437737 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
LINC01088-201ENST00000437737 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
LINC01088-201ENST00000437737 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
LINC01088-201ENST00000437737 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
LINC01088-201ENST00000437737 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
LINC01088-201ENST00000437737 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
LINC01088-201ENST00000437737 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
LINC01088-201ENST00000437737 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
LINC01088-201ENST00000437737 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
LINC01088-201ENST00000437737 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
LINC01088-201ENST00000437737 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
LINC01088-201ENST00000437737 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
LINC01088-201ENST00000437737 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
LINC01088-201ENST00000437737 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
LINC01088-201ENST00000437737 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
LINC01088-201ENST00000437737 H3BS24 57 aa4.39□□□□□ -1.71
LINC01088-201ENST00000437737 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
LINC01088-201ENST00000437737 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
LINC01088-201ENST00000437737 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
LINC01088-201ENST00000437737 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
LINC01088-201ENST00000437737 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
LINC01088-201ENST00000437737 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
LINC01088-201ENST00000437737 MT1AP04731 61 aa4.19□□□□□ -1.74
LINC01088-201ENST00000437737 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
LINC01088-201ENST00000437737 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
LINC01088-201ENST00000437737 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
LINC01088-201ENST00000437737 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
LINC01088-201ENST00000437737 MT3P25713 68 aa3.86□□□□□ -1.79
LINC01088-201ENST00000437737 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
LINC01088-201ENST00000437737 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
LINC01088-201ENST00000437737 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
LINC01088-201ENST00000437737 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
LINC01088-201ENST00000437737 INE1O15225 51 aa3.48□□□□□ -1.85
LINC01088-201ENST00000437737 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
LINC01088-201ENST00000437737 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
LINC01088-201ENST00000437737 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
LINC01088-201ENST00000437737 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
LINC01088-201ENST00000437737 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
LINC01088-201ENST00000437737 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
LINC01088-201ENST00000437737 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
LINC01088-201ENST00000437737 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
LINC01088-201ENST00000437737 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
LINC01088-201ENST00000437737 PRM1P04553 51 aa2.75□□□□□ -1.97
LINC01088-201ENST00000437737 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
LINC01088-201ENST00000437737 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
LINC01088-201ENST00000437737 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
LINC01088-201ENST00000437737 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms