RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 LCE5AQ5TCM9 118 aa7.83□□□□□ -1.16
LMBR1-210ENST00000434503 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
LMBR1-210ENST00000434503 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
LMBR1-210ENST00000434503 MT1EP04732 61 aa7.71□□□□□ -1.18
LMBR1-210ENST00000434503 A6NED7 52 aa7.68□□□□□ -1.18
LMBR1-210ENST00000434503 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
LMBR1-210ENST00000434503 K7ERS5 55 aa7.62□□□□□ -1.19
LMBR1-210ENST00000434503 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
LMBR1-210ENST00000434503 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
LMBR1-210ENST00000434503 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
LMBR1-210ENST00000434503 MT1GP13640 62 aa7.51□□□□□ -1.21
LMBR1-210ENST00000434503 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
LMBR1-210ENST00000434503 MT4P47944 62 aa7.5□□□□□ -1.21
LMBR1-210ENST00000434503 CDC42SE1Q9NRR8 79 aa7.5□□□□□ -1.21
LMBR1-210ENST00000434503 TNP1P09430 55 aa7.47□□□□□ -1.21
LMBR1-210ENST00000434503 HMCN1Q96RW7 5635 aa7.45□□□□□ -1.22
LMBR1-210ENST00000434503 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
LMBR1-210ENST00000434503 MT1MQ8N339 61 aa7.37□□□□□ -1.23
LMBR1-210ENST00000434503 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
LMBR1-210ENST00000434503 AHNAK2Q8IVF2 5795 aa7.33□□□□□ -1.24
LMBR1-210ENST00000434503 KRTAP5-10Q6L8G5 202 aa7.32□□□□□ -1.24
LMBR1-210ENST00000434503 MT1LQ93083 61 aa7.32□□□□□ -1.24
LMBR1-210ENST00000434503 KRTAP5-4Q6L8H1 288 aa7.3□□□□□ -1.24
LMBR1-210ENST00000434503 KRTAP4-2Q9BYR5 136 aa7.3□□□□□ -1.24
LMBR1-210ENST00000434503 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
LMBR1-210ENST00000434503 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
LMBR1-210ENST00000434503 KRTAP4-3Q9BYR4 195 aa7.23□□□□□ -1.25
LMBR1-210ENST00000434503 ROMO1P60602 79 aa7.18□□□□□ -1.26
LMBR1-210ENST00000434503 KRTAP23-1A1A580 65 aa7.17□□□□□ -1.26
LMBR1-210ENST00000434503 KRTAP5-7Q6L8G8 165 aa7.1□□□□□ -1.27
LMBR1-210ENST00000434503 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
LMBR1-210ENST00000434503 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
LMBR1-210ENST00000434503 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
LMBR1-210ENST00000434503 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
LMBR1-210ENST00000434503 KRTAP20-2Q3LI61 65 aa6.91□□□□□ -1.3
LMBR1-210ENST00000434503 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
LMBR1-210ENST00000434503 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
LMBR1-210ENST00000434503 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
LMBR1-210ENST00000434503 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
LMBR1-210ENST00000434503 KRTAP12-4P60329 112 aa6.74□□□□□ -1.33
LMBR1-210ENST00000434503 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
LMBR1-210ENST00000434503 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
LMBR1-210ENST00000434503 KTN1-AS1Q86SY8 53 aa6.59□□□□□ -1.35
LMBR1-210ENST00000434503 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
LMBR1-210ENST00000434503 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
LMBR1-210ENST00000434503 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
LMBR1-210ENST00000434503 SVIPQ8NHG7 77 aa6.3□□□□□ -1.4
LMBR1-210ENST00000434503 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
LMBR1-210ENST00000434503 MT1AP04731 61 aa6.22□□□□□ -1.41
LMBR1-210ENST00000434503 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
LMBR1-210ENST00000434503 MUC5ACP98088 5654 aa6.18□□□□□ -1.42
LMBR1-210ENST00000434503 AHNAKQ09666 5890 aaKnown RBP6.16□□□□□ -1.42
LMBR1-210ENST00000434503 MUC5BQ9HC84 5762 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-210ENST00000434503 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
LMBR1-210ENST00000434503 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
LMBR1-210ENST00000434503 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
LMBR1-210ENST00000434503 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
LMBR1-210ENST00000434503 H3BS24 57 aa5.7□□□□□ -1.5
LMBR1-210ENST00000434503 MT3P25713 68 aa5.7□□□□□ -1.5
LMBR1-210ENST00000434503 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
LMBR1-210ENST00000434503 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
LMBR1-210ENST00000434503 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
LMBR1-210ENST00000434503 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
LMBR1-210ENST00000434503 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
LMBR1-210ENST00000434503 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
LMBR1-210ENST00000434503 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
LMBR1-210ENST00000434503 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
LMBR1-210ENST00000434503 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
LMBR1-210ENST00000434503 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
LMBR1-210ENST00000434503 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
LMBR1-210ENST00000434503 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
LMBR1-210ENST00000434503 INE1O15225 51 aa4.26□□□□□ -1.73
LMBR1-210ENST00000434503 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
LMBR1-210ENST00000434503 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
LMBR1-210ENST00000434503 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
LMBR1-210ENST00000434503 PRM1P04553 51 aa3.65□□□□□ -1.83
LMBR1-210ENST00000434503 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
LMBR1-210ENST00000434503 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 82 ms