RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
TRAPPC4-202ENST00000434101 A8MU10 97 aa4.97□□□□□ -1.61
TRAPPC4-202ENST00000434101 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
TRAPPC4-202ENST00000434101 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
TRAPPC4-202ENST00000434101 A6NED7 52 aa4.92□□□□□ -1.62
TRAPPC4-202ENST00000434101 MT1EP04732 61 aa4.91□□□□□ -1.62
TRAPPC4-202ENST00000434101 UQCR11O14957 56 aa4.87□□□□□ -1.63
TRAPPC4-202ENST00000434101 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
TRAPPC4-202ENST00000434101 TNP1P09430 55 aa4.86□□□□□ -1.63
TRAPPC4-202ENST00000434101 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
TRAPPC4-202ENST00000434101 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
TRAPPC4-202ENST00000434101 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
TRAPPC4-202ENST00000434101 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
TRAPPC4-202ENST00000434101 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
TRAPPC4-202ENST00000434101 MT1GP13640 62 aa4.78□□□□□ -1.64
TRAPPC4-202ENST00000434101 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
TRAPPC4-202ENST00000434101 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
TRAPPC4-202ENST00000434101 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
TRAPPC4-202ENST00000434101 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
TRAPPC4-202ENST00000434101 MT1LQ93083 61 aa4.7□□□□□ -1.66
TRAPPC4-202ENST00000434101 K7ERS5 55 aa4.69□□□□□ -1.66
TRAPPC4-202ENST00000434101 MT1MQ8N339 61 aa4.67□□□□□ -1.66
TRAPPC4-202ENST00000434101 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
TRAPPC4-202ENST00000434101 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
TRAPPC4-202ENST00000434101 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
TRAPPC4-202ENST00000434101 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
TRAPPC4-202ENST00000434101 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
TRAPPC4-202ENST00000434101 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
TRAPPC4-202ENST00000434101 MT4P47944 62 aa4.44□□□□□ -1.7
TRAPPC4-202ENST00000434101 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
TRAPPC4-202ENST00000434101 ROMO1P60602 79 aa4.4□□□□□ -1.71
TRAPPC4-202ENST00000434101 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
TRAPPC4-202ENST00000434101 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
TRAPPC4-202ENST00000434101 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
TRAPPC4-202ENST00000434101 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
TRAPPC4-202ENST00000434101 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
TRAPPC4-202ENST00000434101 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC4-202ENST00000434101 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
TRAPPC4-202ENST00000434101 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
TRAPPC4-202ENST00000434101 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
TRAPPC4-202ENST00000434101 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
TRAPPC4-202ENST00000434101 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
TRAPPC4-202ENST00000434101 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
TRAPPC4-202ENST00000434101 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
TRAPPC4-202ENST00000434101 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
TRAPPC4-202ENST00000434101 MT1AP04731 61 aa4.02□□□□□ -1.77
TRAPPC4-202ENST00000434101 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
TRAPPC4-202ENST00000434101 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
TRAPPC4-202ENST00000434101 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
TRAPPC4-202ENST00000434101 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
TRAPPC4-202ENST00000434101 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
TRAPPC4-202ENST00000434101 MT3P25713 68 aa3.68□□□□□ -1.82
TRAPPC4-202ENST00000434101 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
TRAPPC4-202ENST00000434101 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
TRAPPC4-202ENST00000434101 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
TRAPPC4-202ENST00000434101 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
TRAPPC4-202ENST00000434101 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
TRAPPC4-202ENST00000434101 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
TRAPPC4-202ENST00000434101 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
TRAPPC4-202ENST00000434101 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC4-202ENST00000434101 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-202ENST00000434101 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
TRAPPC4-202ENST00000434101 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
TRAPPC4-202ENST00000434101 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
TRAPPC4-202ENST00000434101 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
TRAPPC4-202ENST00000434101 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
TRAPPC4-202ENST00000434101 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
TRAPPC4-202ENST00000434101 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
TRAPPC4-202ENST00000434101 INE1O15225 51 aa2.86□□□□□ -1.95
TRAPPC4-202ENST00000434101 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
TRAPPC4-202ENST00000434101 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
TRAPPC4-202ENST00000434101 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
TRAPPC4-202ENST00000434101 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
TRAPPC4-202ENST00000434101 PRM1P04553 51 aa2.28□□□□□ -2.04
TRAPPC4-202ENST00000434101 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
TRAPPC4-202ENST00000434101 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
TRAPPC4-202ENST00000434101 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 96.2 ms