RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 PSPHP1O15172 72 aa7.8□□□□□ -1.16
RPUSD3-206ENST00000433535 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
RPUSD3-206ENST00000433535 MT1MQ8N339 61 aa7.78□□□□□ -1.16
RPUSD3-206ENST00000433535 MT1LQ93083 61 aa7.75□□□□□ -1.17
RPUSD3-206ENST00000433535 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
RPUSD3-206ENST00000433535 MT4P47944 62 aa7.72□□□□□ -1.17
RPUSD3-206ENST00000433535 LCE4AQ5TA78 99 aa7.7□□□□□ -1.18
RPUSD3-206ENST00000433535 TNP1P09430 55 aa7.68□□□□□ -1.18
RPUSD3-206ENST00000433535 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
RPUSD3-206ENST00000433535 KRTAP4-3Q9BYR4 195 aa7.65□□□□□ -1.18
RPUSD3-206ENST00000433535 HMCN1Q96RW7 5635 aa7.55□□□□□ -1.2
RPUSD3-206ENST00000433535 KRTAP5-4Q6L8H1 288 aa7.54□□□□□ -1.2
RPUSD3-206ENST00000433535 A6NED7 52 aa7.53□□□□□ -1.2
RPUSD3-206ENST00000433535 K7ERS5 55 aa7.53□□□□□ -1.2
RPUSD3-206ENST00000433535 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
RPUSD3-206ENST00000433535 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
RPUSD3-206ENST00000433535 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
RPUSD3-206ENST00000433535 KRTAP5-10Q6L8G5 202 aa7.37□□□□□ -1.23
RPUSD3-206ENST00000433535 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
RPUSD3-206ENST00000433535 AHNAK2Q8IVF2 5795 aa7.32□□□□□ -1.24
RPUSD3-206ENST00000433535 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
RPUSD3-206ENST00000433535 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
RPUSD3-206ENST00000433535 KRTAP20-2Q3LI61 65 aa7.15□□□□□ -1.26
RPUSD3-206ENST00000433535 KRTAP5-3Q6L8H2 238 aa7.15□□□□□ -1.26
RPUSD3-206ENST00000433535 KRTAP5-5Q701N2 237 aaPredicted RBP7.15□□□□□ -1.26
RPUSD3-206ENST00000433535 ROMO1P60602 79 aa7.13□□□□□ -1.27
RPUSD3-206ENST00000433535 KRTAP5-7Q6L8G8 165 aa7.09□□□□□ -1.27
RPUSD3-206ENST00000433535 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
RPUSD3-206ENST00000433535 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
RPUSD3-206ENST00000433535 KRTAP12-4P60329 112 aa6.99□□□□□ -1.29
RPUSD3-206ENST00000433535 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.3
RPUSD3-206ENST00000433535 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
RPUSD3-206ENST00000433535 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
RPUSD3-206ENST00000433535 BRK1Q8WUW1 75 aa6.78□□□□□ -1.32
RPUSD3-206ENST00000433535 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
RPUSD3-206ENST00000433535 MT1AP04731 61 aa6.58□□□□□ -1.36
RPUSD3-206ENST00000433535 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
RPUSD3-206ENST00000433535 KRTAP5-2Q701N4 177 aa6.57□□□□□ -1.36
RPUSD3-206ENST00000433535 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
RPUSD3-206ENST00000433535 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
RPUSD3-206ENST00000433535 PMAIP1Q13794 54 aa6.39□□□□□ -1.39
RPUSD3-206ENST00000433535 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
RPUSD3-206ENST00000433535 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
RPUSD3-206ENST00000433535 KRTAP6-2Q3LI66 62 aa6.33□□□□□ -1.4
RPUSD3-206ENST00000433535 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
RPUSD3-206ENST00000433535 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
RPUSD3-206ENST00000433535 MUC5ACP98088 5654 aa6.11□□□□□ -1.43
RPUSD3-206ENST00000433535 OBSCNQ5VST9 7968 aa6.08□□□□□ -1.44
RPUSD3-206ENST00000433535 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
RPUSD3-206ENST00000433535 MUC5BQ9HC84 5762 aaPredicted RBP6.03□□□□□ -1.44
RPUSD3-206ENST00000433535 AHNAKQ09666 5890 aaKnown RBP6.01□□□□□ -1.45
RPUSD3-206ENST00000433535 MT3P25713 68 aa6□□□□□ -1.45
RPUSD3-206ENST00000433535 KRTAP5-1Q6L8H4 278 aa5.93□□□□□ -1.46
RPUSD3-206ENST00000433535 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
RPUSD3-206ENST00000433535 LCE1EQ5T753 118 aa5.55□□□□□ -1.52
RPUSD3-206ENST00000433535 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
RPUSD3-206ENST00000433535 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
RPUSD3-206ENST00000433535 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
RPUSD3-206ENST00000433535 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
RPUSD3-206ENST00000433535 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
RPUSD3-206ENST00000433535 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
RPUSD3-206ENST00000433535 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
RPUSD3-206ENST00000433535 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
RPUSD3-206ENST00000433535 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
RPUSD3-206ENST00000433535 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
RPUSD3-206ENST00000433535 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
RPUSD3-206ENST00000433535 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
RPUSD3-206ENST00000433535 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
RPUSD3-206ENST00000433535 PHGR1C9JFL3 82 aa4.31□□□□□ -1.72
RPUSD3-206ENST00000433535 H3BS24 57 aa4.07□□□□□ -1.76
RPUSD3-206ENST00000433535 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
RPUSD3-206ENST00000433535 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
RPUSD3-206ENST00000433535 PRM1P04553 51 aa3.67□□□□□ -1.82
RPUSD3-206ENST00000433535 INE1O15225 51 aa3.52□□□□□ -1.85
RPUSD3-206ENST00000433535 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
RPUSD3-206ENST00000433535 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
RPUSD3-206ENST00000433535 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms