RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
CNOT9-205ENST00000433439 MT1EP04732 61 aa5.65□□□□□ -1.5
CNOT9-205ENST00000433439 SPRR2DP22532 72 aa5.65□□□□□ -1.5
CNOT9-205ENST00000433439 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
CNOT9-205ENST00000433439 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
CNOT9-205ENST00000433439 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
CNOT9-205ENST00000433439 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
CNOT9-205ENST00000433439 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
CNOT9-205ENST00000433439 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
CNOT9-205ENST00000433439 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
CNOT9-205ENST00000433439 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
CNOT9-205ENST00000433439 MT1LQ93083 61 aa5.48□□□□□ -1.53
CNOT9-205ENST00000433439 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
CNOT9-205ENST00000433439 DSTQ03001 7570 aaKnown RBP5.43□□□□□ -1.54
CNOT9-205ENST00000433439 MT1GP13640 62 aa5.43□□□□□ -1.54
CNOT9-205ENST00000433439 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
CNOT9-205ENST00000433439 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
CNOT9-205ENST00000433439 MT1MQ8N339 61 aa5.36□□□□□ -1.55
CNOT9-205ENST00000433439 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
CNOT9-205ENST00000433439 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
CNOT9-205ENST00000433439 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
CNOT9-205ENST00000433439 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
CNOT9-205ENST00000433439 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
CNOT9-205ENST00000433439 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
CNOT9-205ENST00000433439 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
CNOT9-205ENST00000433439 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
CNOT9-205ENST00000433439 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
CNOT9-205ENST00000433439 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
CNOT9-205ENST00000433439 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
CNOT9-205ENST00000433439 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
CNOT9-205ENST00000433439 MT4P47944 62 aa5.01□□□□□ -1.61
CNOT9-205ENST00000433439 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
CNOT9-205ENST00000433439 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
CNOT9-205ENST00000433439 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
CNOT9-205ENST00000433439 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
CNOT9-205ENST00000433439 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CNOT9-205ENST00000433439 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
CNOT9-205ENST00000433439 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
CNOT9-205ENST00000433439 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
CNOT9-205ENST00000433439 MT1AP04731 61 aa4.67□□□□□ -1.66
CNOT9-205ENST00000433439 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
CNOT9-205ENST00000433439 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
CNOT9-205ENST00000433439 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
CNOT9-205ENST00000433439 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
CNOT9-205ENST00000433439 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
CNOT9-205ENST00000433439 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
CNOT9-205ENST00000433439 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
CNOT9-205ENST00000433439 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
CNOT9-205ENST00000433439 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CNOT9-205ENST00000433439 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
CNOT9-205ENST00000433439 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
CNOT9-205ENST00000433439 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
CNOT9-205ENST00000433439 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
CNOT9-205ENST00000433439 MT3P25713 68 aa4.25□□□□□ -1.73
CNOT9-205ENST00000433439 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
CNOT9-205ENST00000433439 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
CNOT9-205ENST00000433439 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
CNOT9-205ENST00000433439 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
CNOT9-205ENST00000433439 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
CNOT9-205ENST00000433439 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CNOT9-205ENST00000433439 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
CNOT9-205ENST00000433439 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
CNOT9-205ENST00000433439 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
CNOT9-205ENST00000433439 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CNOT9-205ENST00000433439 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
CNOT9-205ENST00000433439 INE1O15225 51 aa3.21□□□□□ -1.9
CNOT9-205ENST00000433439 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
CNOT9-205ENST00000433439 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
CNOT9-205ENST00000433439 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
CNOT9-205ENST00000433439 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CNOT9-205ENST00000433439 PRM1P04553 51 aa3.03□□□□□ -1.92
CNOT9-205ENST00000433439 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
CNOT9-205ENST00000433439 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
CNOT9-205ENST00000433439 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CNOT9-205ENST00000433439 H3BS24 57 aa2.72□□□□□ -1.97
CNOT9-205ENST00000433439 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
CNOT9-205ENST00000433439 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
CNOT9-205ENST00000433439 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms