RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
UBE4A-202ENST00000431736 LCE1AQ5T7P2 110 aa1.79□□□□□ -2.12
UBE4A-202ENST00000431736 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
UBE4A-202ENST00000431736 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
UBE4A-202ENST00000431736 MT1XP80297 61 aa1.77□□□□□ -2.13
UBE4A-202ENST00000431736 NEBP20929 6669 aa1.76□□□□□ -2.13
UBE4A-202ENST00000431736 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
UBE4A-202ENST00000431736 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
UBE4A-202ENST00000431736 MT1GP13640 62 aa1.73□□□□□ -2.13
UBE4A-202ENST00000431736 SPRR5A0A1B0GTR4 108 aa1.73□□□□□ -2.13
UBE4A-202ENST00000431736 USH2AO75445 5202 aa1.73□□□□□ -2.13
UBE4A-202ENST00000431736 KRTAP4-2Q9BYR5 136 aa1.72□□□□□ -2.13
UBE4A-202ENST00000431736 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
UBE4A-202ENST00000431736 INE1O15225 51 aa1.71□□□□□ -2.14
UBE4A-202ENST00000431736 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
UBE4A-202ENST00000431736 MUC2Q02817 5179 aa1.71□□□□□ -2.14
UBE4A-202ENST00000431736 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
UBE4A-202ENST00000431736 MT4P47944 62 aa1.7□□□□□ -2.14
UBE4A-202ENST00000431736 KRTAP4-8A0A0G2JLE6 195 aa1.7□□□□□ -2.14
UBE4A-202ENST00000431736 KRTAP4-8Q9BYQ9 185 aa1.7□□□□□ -2.14
UBE4A-202ENST00000431736 LCE3AQ5TA76 89 aa1.69□□□□□ -2.14
UBE4A-202ENST00000431736 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
UBE4A-202ENST00000431736 LCE4AQ5TA78 99 aa1.69□□□□□ -2.14
UBE4A-202ENST00000431736 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
UBE4A-202ENST00000431736 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
UBE4A-202ENST00000431736 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
UBE4A-202ENST00000431736 KRTAP4-9Q9BYQ8 210 aa1.62□□□□□ -2.15
UBE4A-202ENST00000431736 MT1EP04732 61 aa1.62□□□□□ -2.15
UBE4A-202ENST00000431736 KRTAP5-3Q6L8H2 238 aa1.6□□□□□ -2.15
UBE4A-202ENST00000431736 MT1MQ8N339 61 aa1.58□□□□□ -2.16
UBE4A-202ENST00000431736 KRTAP9-9Q9BYP9 154 aa1.58□□□□□ -2.16
UBE4A-202ENST00000431736 KRTAP9-4Q9BYQ2 154 aa1.58□□□□□ -2.16
UBE4A-202ENST00000431736 LCE1DQ5T752 114 aa1.57□□□□□ -2.16
UBE4A-202ENST00000431736 MT1LQ93083 61 aa1.56□□□□□ -2.16
UBE4A-202ENST00000431736 KMT2DO14686 5537 aa1.54□□□□□ -2.16
UBE4A-202ENST00000431736 LCE5AQ5TCM9 118 aa1.54□□□□□ -2.16
UBE4A-202ENST00000431736 LCE3CQ5T5A8 94 aa1.5□□□□□ -2.17
UBE4A-202ENST00000431736 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
UBE4A-202ENST00000431736 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
UBE4A-202ENST00000431736 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
UBE4A-202ENST00000431736 KRTAP4-7Q9BYR0 210 aa1.47□□□□□ -2.17
UBE4A-202ENST00000431736 MT3P25713 68 aa1.44□□□□□ -2.18
UBE4A-202ENST00000431736 KRTAP4-3Q9BYR4 195 aa1.43□□□□□ -2.18
UBE4A-202ENST00000431736 KRTAP4-11Q9BYQ6 195 aa1.42□□□□□ -2.18
UBE4A-202ENST00000431736 MT1AP04731 61 aa1.41□□□□□ -2.18
UBE4A-202ENST00000431736 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
UBE4A-202ENST00000431736 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
UBE4A-202ENST00000431736 DSTQ03001 7570 aaKnown RBP1.36□□□□□ -2.19
UBE4A-202ENST00000431736 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
UBE4A-202ENST00000431736 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
UBE4A-202ENST00000431736 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
UBE4A-202ENST00000431736 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
UBE4A-202ENST00000431736 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
UBE4A-202ENST00000431736 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
UBE4A-202ENST00000431736 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
UBE4A-202ENST00000431736 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
UBE4A-202ENST00000431736 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
UBE4A-202ENST00000431736 LCE3DQ9BYE3 92 aa1.26□□□□□ -2.21
UBE4A-202ENST00000431736 LCE1EQ5T753 118 aa1.26□□□□□ -2.21
UBE4A-202ENST00000431736 LCE3EQ5T5B0 92 aa1.22□□□□□ -2.21
UBE4A-202ENST00000431736 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
UBE4A-202ENST00000431736 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
UBE4A-202ENST00000431736 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
UBE4A-202ENST00000431736 OBSCNQ5VST9 7968 aa1.2□□□□□ -2.22
UBE4A-202ENST00000431736 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
UBE4A-202ENST00000431736 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
UBE4A-202ENST00000431736 LCE1CQ5T751 118 aa1.18□□□□□ -2.22
UBE4A-202ENST00000431736 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
UBE4A-202ENST00000431736 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
UBE4A-202ENST00000431736 KRTAP9-6A8MVA2 160 aa1.07□□□□□ -2.24
UBE4A-202ENST00000431736 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
UBE4A-202ENST00000431736 PRM1P04553 51 aa1.03□□□□□ -2.24
UBE4A-202ENST00000431736 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
UBE4A-202ENST00000431736 PHGR1C9JFL3 82 aa1□□□□□ -2.25
UBE4A-202ENST00000431736 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
UBE4A-202ENST00000431736 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
UBE4A-202ENST00000431736 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms