RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
HMGN1-206ENST00000431390 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
HMGN1-206ENST00000431390 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
HMGN1-206ENST00000431390 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.29
HMGN1-206ENST00000431390 KRTAP2-1Q9BYU5 128 aa6.96□□□□□ -1.29
HMGN1-206ENST00000431390 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
HMGN1-206ENST00000431390 LCE1AQ5T7P2 110 aa6.91□□□□□ -1.3
HMGN1-206ENST00000431390 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
HMGN1-206ENST00000431390 SPRR2DP22532 72 aa6.84□□□□□ -1.31
HMGN1-206ENST00000431390 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
HMGN1-206ENST00000431390 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
HMGN1-206ENST00000431390 KRTAP19-7Q3SYF9 63 aa6.76□□□□□ -1.33
HMGN1-206ENST00000431390 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
HMGN1-206ENST00000431390 MT1EP04732 61 aa6.65□□□□□ -1.34
HMGN1-206ENST00000431390 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.35
HMGN1-206ENST00000431390 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
HMGN1-206ENST00000431390 H3BS24 57 aa6.59□□□□□ -1.35
HMGN1-206ENST00000431390 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
HMGN1-206ENST00000431390 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
HMGN1-206ENST00000431390 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
HMGN1-206ENST00000431390 MT1LQ93083 61 aa6.5□□□□□ -1.37
HMGN1-206ENST00000431390 DSTQ03001 7570 aaKnown RBP6.46□□□□□ -1.37
HMGN1-206ENST00000431390 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
HMGN1-206ENST00000431390 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
HMGN1-206ENST00000431390 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.39
HMGN1-206ENST00000431390 MT1GP13640 62 aa6.38□□□□□ -1.39
HMGN1-206ENST00000431390 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
HMGN1-206ENST00000431390 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
HMGN1-206ENST00000431390 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
HMGN1-206ENST00000431390 MT1MQ8N339 61 aa6.28□□□□□ -1.4
HMGN1-206ENST00000431390 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
HMGN1-206ENST00000431390 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
HMGN1-206ENST00000431390 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
HMGN1-206ENST00000431390 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
HMGN1-206ENST00000431390 MT4P47944 62 aa6.04□□□□□ -1.44
HMGN1-206ENST00000431390 HMCN1Q96RW7 5635 aa6.01□□□□□ -1.45
HMGN1-206ENST00000431390 AHNAK2Q8IVF2 5795 aa5.98□□□□□ -1.45
HMGN1-206ENST00000431390 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
HMGN1-206ENST00000431390 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
HMGN1-206ENST00000431390 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
HMGN1-206ENST00000431390 KRTAP5-10Q6L8G5 202 aa5.93□□□□□ -1.46
HMGN1-206ENST00000431390 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
HMGN1-206ENST00000431390 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
HMGN1-206ENST00000431390 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
HMGN1-206ENST00000431390 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
HMGN1-206ENST00000431390 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-206ENST00000431390 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
HMGN1-206ENST00000431390 MT1AP04731 61 aa5.55□□□□□ -1.52
HMGN1-206ENST00000431390 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
HMGN1-206ENST00000431390 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
HMGN1-206ENST00000431390 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
HMGN1-206ENST00000431390 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
HMGN1-206ENST00000431390 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
HMGN1-206ENST00000431390 MT3P25713 68 aa5.04□□□□□ -1.6
HMGN1-206ENST00000431390 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
HMGN1-206ENST00000431390 MUC5ACP98088 5654 aa5□□□□□ -1.61
HMGN1-206ENST00000431390 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
HMGN1-206ENST00000431390 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
HMGN1-206ENST00000431390 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
HMGN1-206ENST00000431390 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
HMGN1-206ENST00000431390 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
HMGN1-206ENST00000431390 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
HMGN1-206ENST00000431390 INE1O15225 51 aa4.67□□□□□ -1.66
HMGN1-206ENST00000431390 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
HMGN1-206ENST00000431390 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
HMGN1-206ENST00000431390 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
HMGN1-206ENST00000431390 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
HMGN1-206ENST00000431390 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
HMGN1-206ENST00000431390 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
HMGN1-206ENST00000431390 PRM1P04553 51 aa3.91□□□□□ -1.78
HMGN1-206ENST00000431390 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
HMGN1-206ENST00000431390 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.84
HMGN1-206ENST00000431390 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
HMGN1-206ENST00000431390 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
HMGN1-206ENST00000431390 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
HMGN1-206ENST00000431390 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
HMGN1-206ENST00000431390 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
HMGN1-206ENST00000431390 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms