RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
NEDD4L-206ENST00000431212 MT1GP13640 62 aa3.29□□□□□ -1.88
NEDD4L-206ENST00000431212 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
NEDD4L-206ENST00000431212 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
NEDD4L-206ENST00000431212 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
NEDD4L-206ENST00000431212 MT1MQ8N339 61 aa3.21□□□□□ -1.9
NEDD4L-206ENST00000431212 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
NEDD4L-206ENST00000431212 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
NEDD4L-206ENST00000431212 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
NEDD4L-206ENST00000431212 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
NEDD4L-206ENST00000431212 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
NEDD4L-206ENST00000431212 KRTAP9-2Q9BYQ4 174 aa3.07□□□□□ -1.92
NEDD4L-206ENST00000431212 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
NEDD4L-206ENST00000431212 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
NEDD4L-206ENST00000431212 MT1AP04731 61 aa3.04□□□□□ -1.92
NEDD4L-206ENST00000431212 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.93
NEDD4L-206ENST00000431212 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
NEDD4L-206ENST00000431212 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
NEDD4L-206ENST00000431212 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
NEDD4L-206ENST00000431212 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
NEDD4L-206ENST00000431212 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
NEDD4L-206ENST00000431212 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
NEDD4L-206ENST00000431212 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
NEDD4L-206ENST00000431212 PRM1P04553 51 aa2.94□□□□□ -1.94
NEDD4L-206ENST00000431212 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
NEDD4L-206ENST00000431212 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
NEDD4L-206ENST00000431212 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
NEDD4L-206ENST00000431212 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
NEDD4L-206ENST00000431212 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
NEDD4L-206ENST00000431212 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
NEDD4L-206ENST00000431212 KRTAP9-4Q9BYQ2 154 aa2.73□□□□□ -1.97
NEDD4L-206ENST00000431212 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
NEDD4L-206ENST00000431212 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
NEDD4L-206ENST00000431212 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
NEDD4L-206ENST00000431212 SPRR2EP22531 72 aa2.63□□□□□ -1.99
NEDD4L-206ENST00000431212 SPRR2BP35325 72 aa2.63□□□□□ -1.99
NEDD4L-206ENST00000431212 SPRR2AP35326 72 aa2.63□□□□□ -1.99
NEDD4L-206ENST00000431212 MT3P25713 68 aa2.62□□□□□ -1.99
NEDD4L-206ENST00000431212 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
NEDD4L-206ENST00000431212 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
NEDD4L-206ENST00000431212 SPRR2DP22532 72 aa2.5□□□□□ -2.01
NEDD4L-206ENST00000431212 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
NEDD4L-206ENST00000431212 NEBP20929 6669 aa2.42□□□□□ -2.02
NEDD4L-206ENST00000431212 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
NEDD4L-206ENST00000431212 KRTAP20-1Q3LI63 56 aa2.35□□□□□ -2.03
NEDD4L-206ENST00000431212 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
NEDD4L-206ENST00000431212 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
NEDD4L-206ENST00000431212 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
NEDD4L-206ENST00000431212 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
NEDD4L-206ENST00000431212 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
NEDD4L-206ENST00000431212 MT4P47944 62 aa2.22□□□□□ -2.05
NEDD4L-206ENST00000431212 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
NEDD4L-206ENST00000431212 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
NEDD4L-206ENST00000431212 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
NEDD4L-206ENST00000431212 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
NEDD4L-206ENST00000431212 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
NEDD4L-206ENST00000431212 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
NEDD4L-206ENST00000431212 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
NEDD4L-206ENST00000431212 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
NEDD4L-206ENST00000431212 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
NEDD4L-206ENST00000431212 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
NEDD4L-206ENST00000431212 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
NEDD4L-206ENST00000431212 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
NEDD4L-206ENST00000431212 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
NEDD4L-206ENST00000431212 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
NEDD4L-206ENST00000431212 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
NEDD4L-206ENST00000431212 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
NEDD4L-206ENST00000431212 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
NEDD4L-206ENST00000431212 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-206ENST00000431212 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
NEDD4L-206ENST00000431212 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
NEDD4L-206ENST00000431212 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
NEDD4L-206ENST00000431212 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
NEDD4L-206ENST00000431212 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
NEDD4L-206ENST00000431212 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
NEDD4L-206ENST00000431212 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
NEDD4L-206ENST00000431212 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms