RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 SPRR2BP35325 72 aa3.52□□□□□ -1.85
ECHDC1-207ENST00000430841 SPRR2AP35326 72 aa3.52□□□□□ -1.85
ECHDC1-207ENST00000430841 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
ECHDC1-207ENST00000430841 MT1BP07438 61 aa3.51□□□□□ -1.85
ECHDC1-207ENST00000430841 CSAG1Q6PB30 78 aa3.51□□□□□ -1.85
ECHDC1-207ENST00000430841 S4R3F8 94 aa3.51□□□□□ -1.85
ECHDC1-207ENST00000430841 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
ECHDC1-207ENST00000430841 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
ECHDC1-207ENST00000430841 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
ECHDC1-207ENST00000430841 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
ECHDC1-207ENST00000430841 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
ECHDC1-207ENST00000430841 A8MU10 97 aa3.45□□□□□ -1.86
ECHDC1-207ENST00000430841 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
ECHDC1-207ENST00000430841 CRIPTQ9P021 101 aa3.43□□□□□ -1.86
ECHDC1-207ENST00000430841 SPRR2DP22532 72 aa3.42□□□□□ -1.86
ECHDC1-207ENST00000430841 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
ECHDC1-207ENST00000430841 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
ECHDC1-207ENST00000430841 A0A1B0GU33 70 aa3.36□□□□□ -1.87
ECHDC1-207ENST00000430841 K7ERS5 55 aa3.36□□□□□ -1.87
ECHDC1-207ENST00000430841 PLAC4Q8WY50 150 aa3.35□□□□□ -1.87
ECHDC1-207ENST00000430841 H0YAA0 97 aa3.29□□□□□ -1.88
ECHDC1-207ENST00000430841 LINC01554Q52M75 96 aa3.29□□□□□ -1.88
ECHDC1-207ENST00000430841 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
ECHDC1-207ENST00000430841 KRTAP12-2P59991 146 aa3.25□□□□□ -1.89
ECHDC1-207ENST00000430841 MT1XP80297 61 aa3.24□□□□□ -1.89
ECHDC1-207ENST00000430841 ADM2Q7Z4H4 148 aa3.24□□□□□ -1.89
ECHDC1-207ENST00000430841 R4GN34 69 aa3.24□□□□□ -1.89
ECHDC1-207ENST00000430841 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
ECHDC1-207ENST00000430841 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
ECHDC1-207ENST00000430841 M0QZ58 72 aa3.19□□□□□ -1.9
ECHDC1-207ENST00000430841 ROMO1P60602 79 aa3.19□□□□□ -1.9
ECHDC1-207ENST00000430841 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
ECHDC1-207ENST00000430841 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-207ENST00000430841 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
ECHDC1-207ENST00000430841 P0C880 135 aa3.08□□□□□ -1.92
ECHDC1-207ENST00000430841 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
ECHDC1-207ENST00000430841 A0A0D9SG42 100 aa3.06□□□□□ -1.92
ECHDC1-207ENST00000430841 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
ECHDC1-207ENST00000430841 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
ECHDC1-207ENST00000430841 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
ECHDC1-207ENST00000430841 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-207ENST00000430841 MT4P47944 62 aa3□□□□□ -1.93
ECHDC1-207ENST00000430841 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
ECHDC1-207ENST00000430841 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
ECHDC1-207ENST00000430841 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
ECHDC1-207ENST00000430841 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
ECHDC1-207ENST00000430841 MT1EP04732 61 aa2.91□□□□□ -1.94
ECHDC1-207ENST00000430841 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
ECHDC1-207ENST00000430841 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
ECHDC1-207ENST00000430841 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
ECHDC1-207ENST00000430841 MT1GP13640 62 aa2.87□□□□□ -1.95
ECHDC1-207ENST00000430841 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
ECHDC1-207ENST00000430841 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
ECHDC1-207ENST00000430841 TNP1P09430 55 aa2.81□□□□□ -1.96
ECHDC1-207ENST00000430841 MT1MQ8N339 61 aa2.8□□□□□ -1.96
ECHDC1-207ENST00000430841 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
ECHDC1-207ENST00000430841 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
ECHDC1-207ENST00000430841 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
ECHDC1-207ENST00000430841 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-207ENST00000430841 MT1LQ93083 61 aa2.74□□□□□ -1.97
ECHDC1-207ENST00000430841 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
ECHDC1-207ENST00000430841 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
ECHDC1-207ENST00000430841 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
ECHDC1-207ENST00000430841 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
ECHDC1-207ENST00000430841 KRTAP12-3P60328 96 aa2.54□□□□□ -2
ECHDC1-207ENST00000430841 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
ECHDC1-207ENST00000430841 INE1O15225 51 aa2.44□□□□□ -2.02
ECHDC1-207ENST00000430841 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
ECHDC1-207ENST00000430841 MT1AP04731 61 aa2.34□□□□□ -2.03
ECHDC1-207ENST00000430841 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
ECHDC1-207ENST00000430841 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
ECHDC1-207ENST00000430841 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
ECHDC1-207ENST00000430841 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ECHDC1-207ENST00000430841 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
ECHDC1-207ENST00000430841 PRM1P04553 51 aa1.63□□□□□ -2.15
ECHDC1-207ENST00000430841 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
ECHDC1-207ENST00000430841 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 94.2 ms