RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
RCC1-208ENST00000429051 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
RCC1-208ENST00000429051 ROMO1P60602 79 aa4.59□□□□□ -1.67
RCC1-208ENST00000429051 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
RCC1-208ENST00000429051 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
RCC1-208ENST00000429051 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
RCC1-208ENST00000429051 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
RCC1-208ENST00000429051 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
RCC1-208ENST00000429051 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
RCC1-208ENST00000429051 SPRR2DP22532 72 aa4.47□□□□□ -1.69
RCC1-208ENST00000429051 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
RCC1-208ENST00000429051 TNP1P09430 55 aa4.41□□□□□ -1.7
RCC1-208ENST00000429051 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
RCC1-208ENST00000429051 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
RCC1-208ENST00000429051 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
RCC1-208ENST00000429051 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
RCC1-208ENST00000429051 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
RCC1-208ENST00000429051 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
RCC1-208ENST00000429051 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
RCC1-208ENST00000429051 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
RCC1-208ENST00000429051 MT1EP04732 61 aa4.28□□□□□ -1.72
RCC1-208ENST00000429051 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
RCC1-208ENST00000429051 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
RCC1-208ENST00000429051 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
RCC1-208ENST00000429051 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
RCC1-208ENST00000429051 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
RCC1-208ENST00000429051 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
RCC1-208ENST00000429051 MT1GP13640 62 aa4.17□□□□□ -1.74
RCC1-208ENST00000429051 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
RCC1-208ENST00000429051 MT1LQ93083 61 aa4.09□□□□□ -1.75
RCC1-208ENST00000429051 MT1MQ8N339 61 aa4.08□□□□□ -1.76
RCC1-208ENST00000429051 KRTAP12-3P60328 96 aa4□□□□□ -1.77
RCC1-208ENST00000429051 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
RCC1-208ENST00000429051 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
RCC1-208ENST00000429051 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
RCC1-208ENST00000429051 MT4P47944 62 aa3.89□□□□□ -1.79
RCC1-208ENST00000429051 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
RCC1-208ENST00000429051 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
RCC1-208ENST00000429051 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
RCC1-208ENST00000429051 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
RCC1-208ENST00000429051 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
RCC1-208ENST00000429051 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
RCC1-208ENST00000429051 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
RCC1-208ENST00000429051 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
RCC1-208ENST00000429051 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
RCC1-208ENST00000429051 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
RCC1-208ENST00000429051 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
RCC1-208ENST00000429051 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
RCC1-208ENST00000429051 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
RCC1-208ENST00000429051 MT1AP04731 61 aa3.5□□□□□ -1.85
RCC1-208ENST00000429051 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
RCC1-208ENST00000429051 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
RCC1-208ENST00000429051 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
RCC1-208ENST00000429051 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
RCC1-208ENST00000429051 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
RCC1-208ENST00000429051 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
RCC1-208ENST00000429051 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
RCC1-208ENST00000429051 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
RCC1-208ENST00000429051 MT3P25713 68 aa3.22□□□□□ -1.89
RCC1-208ENST00000429051 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
RCC1-208ENST00000429051 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
RCC1-208ENST00000429051 INE1O15225 51 aa3.1□□□□□ -1.91
RCC1-208ENST00000429051 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
RCC1-208ENST00000429051 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
RCC1-208ENST00000429051 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
RCC1-208ENST00000429051 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
RCC1-208ENST00000429051 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
RCC1-208ENST00000429051 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
RCC1-208ENST00000429051 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
RCC1-208ENST00000429051 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
RCC1-208ENST00000429051 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
RCC1-208ENST00000429051 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
RCC1-208ENST00000429051 PRM1P04553 51 aa2.31□□□□□ -2.04
RCC1-208ENST00000429051 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
RCC1-208ENST00000429051 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
RCC1-208ENST00000429051 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
RCC1-208ENST00000429051 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
RCC1-208ENST00000429051 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 101.3 ms