RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 K7ERS5 55 aa5.67□□□□□ -1.5
SGCE-204ENST00000428696 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
SGCE-204ENST00000428696 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
SGCE-204ENST00000428696 TNP1P09430 55 aa5.59□□□□□ -1.51
SGCE-204ENST00000428696 SPRR2EP22531 72 aa5.57□□□□□ -1.52
SGCE-204ENST00000428696 SPRR2BP35325 72 aa5.57□□□□□ -1.52
SGCE-204ENST00000428696 SPRR2AP35326 72 aa5.57□□□□□ -1.52
SGCE-204ENST00000428696 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
SGCE-204ENST00000428696 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
SGCE-204ENST00000428696 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.45□□□□□ -1.54
SGCE-204ENST00000428696 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
SGCE-204ENST00000428696 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
SGCE-204ENST00000428696 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
SGCE-204ENST00000428696 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
SGCE-204ENST00000428696 SPRR2DP22532 72 aa5.38□□□□□ -1.55
SGCE-204ENST00000428696 MT1EP04732 61 aa5.37□□□□□ -1.55
SGCE-204ENST00000428696 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
SGCE-204ENST00000428696 ROMO1P60602 79 aa5.31□□□□□ -1.56
SGCE-204ENST00000428696 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
SGCE-204ENST00000428696 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
SGCE-204ENST00000428696 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
SGCE-204ENST00000428696 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
SGCE-204ENST00000428696 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
SGCE-204ENST00000428696 MT1GP13640 62 aa5.18□□□□□ -1.58
SGCE-204ENST00000428696 MT1LQ93083 61 aa5.18□□□□□ -1.58
SGCE-204ENST00000428696 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
SGCE-204ENST00000428696 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
SGCE-204ENST00000428696 KRTAP5-11Q6L8G4 156 aa5.15□□□□□ -1.58
SGCE-204ENST00000428696 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
SGCE-204ENST00000428696 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
SGCE-204ENST00000428696 MT1MQ8N339 61 aa5.09□□□□□ -1.59
SGCE-204ENST00000428696 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
SGCE-204ENST00000428696 PMAIP1Q13794 54 aa4.96□□□□□ -1.62
SGCE-204ENST00000428696 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
SGCE-204ENST00000428696 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SGCE-204ENST00000428696 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
SGCE-204ENST00000428696 MT4P47944 62 aa4.72□□□□□ -1.65
SGCE-204ENST00000428696 MT3P25713 68 aa4.68□□□□□ -1.66
SGCE-204ENST00000428696 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
SGCE-204ENST00000428696 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.66
SGCE-204ENST00000428696 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
SGCE-204ENST00000428696 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SGCE-204ENST00000428696 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
SGCE-204ENST00000428696 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
SGCE-204ENST00000428696 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
SGCE-204ENST00000428696 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
SGCE-204ENST00000428696 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
SGCE-204ENST00000428696 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SGCE-204ENST00000428696 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
SGCE-204ENST00000428696 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
SGCE-204ENST00000428696 MT1AP04731 61 aa4.4□□□□□ -1.7
SGCE-204ENST00000428696 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
SGCE-204ENST00000428696 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
SGCE-204ENST00000428696 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
SGCE-204ENST00000428696 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
SGCE-204ENST00000428696 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SGCE-204ENST00000428696 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
SGCE-204ENST00000428696 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
SGCE-204ENST00000428696 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
SGCE-204ENST00000428696 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
SGCE-204ENST00000428696 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
SGCE-204ENST00000428696 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
SGCE-204ENST00000428696 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
SGCE-204ENST00000428696 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
SGCE-204ENST00000428696 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SGCE-204ENST00000428696 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
SGCE-204ENST00000428696 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
SGCE-204ENST00000428696 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
SGCE-204ENST00000428696 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
SGCE-204ENST00000428696 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
SGCE-204ENST00000428696 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
SGCE-204ENST00000428696 INE1O15225 51 aa2.76□□□□□ -1.97
SGCE-204ENST00000428696 PRM1P04553 51 aa2.75□□□□□ -1.97
SGCE-204ENST00000428696 PHGR1C9JFL3 82 aa2.59□□□□□ -2
SGCE-204ENST00000428696 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
SGCE-204ENST00000428696 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SGCE-204ENST00000428696 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 259.8 ms