RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
CTDSP1-202ENST00000428361 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
CTDSP1-202ENST00000428361 A6NED7 52 aa5.54□□□□□ -1.52
CTDSP1-202ENST00000428361 TNP1P09430 55 aa5.54□□□□□ -1.52
CTDSP1-202ENST00000428361 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
CTDSP1-202ENST00000428361 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
CTDSP1-202ENST00000428361 MT1MQ8N339 61 aa5.49□□□□□ -1.53
CTDSP1-202ENST00000428361 A8MU10 97 aa5.48□□□□□ -1.53
CTDSP1-202ENST00000428361 MT1LQ93083 61 aa5.48□□□□□ -1.53
CTDSP1-202ENST00000428361 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
CTDSP1-202ENST00000428361 UQCR11O14957 56 aa5.45□□□□□ -1.54
CTDSP1-202ENST00000428361 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
CTDSP1-202ENST00000428361 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
CTDSP1-202ENST00000428361 MT4P47944 62 aa5.39□□□□□ -1.55
CTDSP1-202ENST00000428361 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
CTDSP1-202ENST00000428361 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
CTDSP1-202ENST00000428361 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
CTDSP1-202ENST00000428361 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
CTDSP1-202ENST00000428361 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
CTDSP1-202ENST00000428361 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
CTDSP1-202ENST00000428361 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
CTDSP1-202ENST00000428361 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
CTDSP1-202ENST00000428361 K7ERS5 55 aa5.16□□□□□ -1.58
CTDSP1-202ENST00000428361 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
CTDSP1-202ENST00000428361 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
CTDSP1-202ENST00000428361 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
CTDSP1-202ENST00000428361 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
CTDSP1-202ENST00000428361 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
CTDSP1-202ENST00000428361 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
CTDSP1-202ENST00000428361 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
CTDSP1-202ENST00000428361 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
CTDSP1-202ENST00000428361 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
CTDSP1-202ENST00000428361 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
CTDSP1-202ENST00000428361 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CTDSP1-202ENST00000428361 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
CTDSP1-202ENST00000428361 ROMO1P60602 79 aa4.93□□□□□ -1.62
CTDSP1-202ENST00000428361 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
CTDSP1-202ENST00000428361 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
CTDSP1-202ENST00000428361 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
CTDSP1-202ENST00000428361 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
CTDSP1-202ENST00000428361 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
CTDSP1-202ENST00000428361 MT1AP04731 61 aa4.69□□□□□ -1.66
CTDSP1-202ENST00000428361 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
CTDSP1-202ENST00000428361 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
CTDSP1-202ENST00000428361 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
CTDSP1-202ENST00000428361 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CTDSP1-202ENST00000428361 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
CTDSP1-202ENST00000428361 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
CTDSP1-202ENST00000428361 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
CTDSP1-202ENST00000428361 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CTDSP1-202ENST00000428361 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
CTDSP1-202ENST00000428361 MT3P25713 68 aa4.34□□□□□ -1.71
CTDSP1-202ENST00000428361 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
CTDSP1-202ENST00000428361 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
CTDSP1-202ENST00000428361 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
CTDSP1-202ENST00000428361 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CTDSP1-202ENST00000428361 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
CTDSP1-202ENST00000428361 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
CTDSP1-202ENST00000428361 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
CTDSP1-202ENST00000428361 H3BS24 57 aa3.95□□□□□ -1.78
CTDSP1-202ENST00000428361 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
CTDSP1-202ENST00000428361 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
CTDSP1-202ENST00000428361 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
CTDSP1-202ENST00000428361 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
CTDSP1-202ENST00000428361 INE1O15225 51 aa3.51□□□□□ -1.85
CTDSP1-202ENST00000428361 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
CTDSP1-202ENST00000428361 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
CTDSP1-202ENST00000428361 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
CTDSP1-202ENST00000428361 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CTDSP1-202ENST00000428361 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
CTDSP1-202ENST00000428361 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CTDSP1-202ENST00000428361 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CTDSP1-202ENST00000428361 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
CTDSP1-202ENST00000428361 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CTDSP1-202ENST00000428361 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
CTDSP1-202ENST00000428361 PRM1P04553 51 aa2.53□□□□□ -2
CTDSP1-202ENST00000428361 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CTDSP1-202ENST00000428361 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms