RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
SMC1A-203ENST00000428014 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
SMC1A-203ENST00000428014 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
SMC1A-203ENST00000428014 A0A0D9SG42 100 aa3.58□□□□□ -1.84
SMC1A-203ENST00000428014 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
SMC1A-203ENST00000428014 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
SMC1A-203ENST00000428014 A8MU10 97 aa3.56□□□□□ -1.84
SMC1A-203ENST00000428014 SPRR2EP22531 72 aa3.56□□□□□ -1.84
SMC1A-203ENST00000428014 SPRR2BP35325 72 aa3.56□□□□□ -1.84
SMC1A-203ENST00000428014 SPRR2AP35326 72 aa3.56□□□□□ -1.84
SMC1A-203ENST00000428014 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
SMC1A-203ENST00000428014 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
SMC1A-203ENST00000428014 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
SMC1A-203ENST00000428014 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
SMC1A-203ENST00000428014 K7ERS5 55 aa3.51□□□□□ -1.85
SMC1A-203ENST00000428014 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SMC1A-203ENST00000428014 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
SMC1A-203ENST00000428014 SPRR2DP22532 72 aa3.45□□□□□ -1.86
SMC1A-203ENST00000428014 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
SMC1A-203ENST00000428014 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
SMC1A-203ENST00000428014 MT1EP04732 61 aa3.4□□□□□ -1.87
SMC1A-203ENST00000428014 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SMC1A-203ENST00000428014 TNP1P09430 55 aa3.39□□□□□ -1.87
SMC1A-203ENST00000428014 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
SMC1A-203ENST00000428014 MT1GP13640 62 aa3.36□□□□□ -1.87
SMC1A-203ENST00000428014 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
SMC1A-203ENST00000428014 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SMC1A-203ENST00000428014 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
SMC1A-203ENST00000428014 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
SMC1A-203ENST00000428014 ROMO1P60602 79 aa3.3□□□□□ -1.88
SMC1A-203ENST00000428014 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
SMC1A-203ENST00000428014 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
SMC1A-203ENST00000428014 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
SMC1A-203ENST00000428014 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
SMC1A-203ENST00000428014 MT1LQ93083 61 aa3.26□□□□□ -1.89
SMC1A-203ENST00000428014 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
SMC1A-203ENST00000428014 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
SMC1A-203ENST00000428014 MT1MQ8N339 61 aa3.23□□□□□ -1.89
SMC1A-203ENST00000428014 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
SMC1A-203ENST00000428014 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
SMC1A-203ENST00000428014 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
SMC1A-203ENST00000428014 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
SMC1A-203ENST00000428014 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
SMC1A-203ENST00000428014 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
SMC1A-203ENST00000428014 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
SMC1A-203ENST00000428014 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
SMC1A-203ENST00000428014 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SMC1A-203ENST00000428014 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
SMC1A-203ENST00000428014 MT4P47944 62 aa2.94□□□□□ -1.94
SMC1A-203ENST00000428014 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
SMC1A-203ENST00000428014 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
SMC1A-203ENST00000428014 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
SMC1A-203ENST00000428014 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
SMC1A-203ENST00000428014 MT1AP04731 61 aa2.81□□□□□ -1.96
SMC1A-203ENST00000428014 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
SMC1A-203ENST00000428014 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
SMC1A-203ENST00000428014 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SMC1A-203ENST00000428014 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
SMC1A-203ENST00000428014 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
SMC1A-203ENST00000428014 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
SMC1A-203ENST00000428014 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
SMC1A-203ENST00000428014 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
SMC1A-203ENST00000428014 LUZP6Q538Z0 58 aa2.55□□□□□ -2
SMC1A-203ENST00000428014 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
SMC1A-203ENST00000428014 KRTAP5-8O75690 187 aa2.53□□□□□ -2
SMC1A-203ENST00000428014 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
SMC1A-203ENST00000428014 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
SMC1A-203ENST00000428014 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
SMC1A-203ENST00000428014 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SMC1A-203ENST00000428014 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
SMC1A-203ENST00000428014 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
SMC1A-203ENST00000428014 INE1O15225 51 aa1.99□□□□□ -2.09
SMC1A-203ENST00000428014 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SMC1A-203ENST00000428014 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SMC1A-203ENST00000428014 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
SMC1A-203ENST00000428014 PRM1P04553 51 aa1.69□□□□□ -2.14
SMC1A-203ENST00000428014 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
SMC1A-203ENST00000428014 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 98.2 ms