RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 LCE3BQ5TA77 95 aa9.08□□□□□ -0.96
HERPUD2-205ENST00000427455 KRTAP2-2Q9BYT5 123 aa9.07□□□□□ -0.96
HERPUD2-205ENST00000427455 KRTAP2-1Q9BYU5 128 aa9.07□□□□□ -0.96
HERPUD2-205ENST00000427455 CDC42SE1Q9NRR8 79 aa9.01□□□□□ -0.97
HERPUD2-205ENST00000427455 MT1GP13640 62 aa9□□□□□ -0.97
HERPUD2-205ENST00000427455 MT1LQ93083 61 aa8.98□□□□□ -0.97
HERPUD2-205ENST00000427455 PP632Q6XCG6 107 aa8.95□□□□□ -0.98
HERPUD2-205ENST00000427455 KRTAP12-3P60328 96 aa8.93□□□□□ -0.98
HERPUD2-205ENST00000427455 MT1MQ8N339 61 aa8.86□□□□□ -0.99
HERPUD2-205ENST00000427455 DSTQ03001 7570 aaKnown RBP8.83□□□□□ -1
HERPUD2-205ENST00000427455 KRTAP23-1A1A580 65 aa8.81□□□□□ -1
HERPUD2-205ENST00000427455 ROMO1P60602 79 aa8.81□□□□□ -1
HERPUD2-205ENST00000427455 KRTAP4-3Q9BYR4 195 aa8.6□□□□□ -1.03
HERPUD2-205ENST00000427455 KRTAP4-7Q9BYR0 210 aa8.53□□□□□ -1.04
HERPUD2-205ENST00000427455 KRTAP19-4Q3LI73 84 aa8.47□□□□□ -1.05
HERPUD2-205ENST00000427455 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
HERPUD2-205ENST00000427455 BRK1Q8WUW1 75 aa8.44□□□□□ -1.06
HERPUD2-205ENST00000427455 LCE4AQ5TA78 99 aa8.31□□□□□ -1.08
HERPUD2-205ENST00000427455 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
HERPUD2-205ENST00000427455 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
HERPUD2-205ENST00000427455 LCE3CQ5T5A8 94 aa8.25□□□□□ -1.09
HERPUD2-205ENST00000427455 KRTAP5-4Q6L8H1 288 aa8.22□□□□□ -1.09
HERPUD2-205ENST00000427455 LCE1DQ5T752 114 aa8.2□□□□□ -1.1
HERPUD2-205ENST00000427455 MT4P47944 62 aa8.14□□□□□ -1.11
HERPUD2-205ENST00000427455 HMCN1Q96RW7 5635 aa8.12□□□□□ -1.11
HERPUD2-205ENST00000427455 KRTAP5-5Q701N2 237 aaPredicted RBP8.1□□□□□ -1.11
HERPUD2-205ENST00000427455 LOC100996750A0A140TA64 210 aa8.06□□□□□ -1.12
HERPUD2-205ENST00000427455 KRTAP4-6Q9BYQ5 205 aa7.95□□□□□ -1.14
HERPUD2-205ENST00000427455 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
HERPUD2-205ENST00000427455 GPR98Q8WXG9 6306 aa7.79□□□□□ -1.16
HERPUD2-205ENST00000427455 KRTAP12-4P60329 112 aa7.79□□□□□ -1.16
HERPUD2-205ENST00000427455 KRTAP9-6A8MVA2 160 aa7.77□□□□□ -1.17
HERPUD2-205ENST00000427455 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
HERPUD2-205ENST00000427455 KRTAP20-2Q3LI61 65 aa7.74□□□□□ -1.17
HERPUD2-205ENST00000427455 SYNE1Q8NF91 8797 aaKnown RBP7.73□□□□□ -1.17
HERPUD2-205ENST00000427455 AHNAK2Q8IVF2 5795 aa7.67□□□□□ -1.18
HERPUD2-205ENST00000427455 PRO0628Q9UI54 55 aa7.66□□□□□ -1.18
HERPUD2-205ENST00000427455 MT1AP04731 61 aa7.65□□□□□ -1.18
HERPUD2-205ENST00000427455 KRTAP6-1Q3LI64 71 aa7.57□□□□□ -1.2
HERPUD2-205ENST00000427455 PRAC1Q96KF2 57 aa7.56□□□□□ -1.2
HERPUD2-205ENST00000427455 KRTAP5-3Q6L8H2 238 aa7.49□□□□□ -1.21
HERPUD2-205ENST00000427455 KRTAP5-10Q6L8G5 202 aa7.42□□□□□ -1.22
HERPUD2-205ENST00000427455 KRTAP9-4Q9BYQ2 154 aa7.34□□□□□ -1.23
HERPUD2-205ENST00000427455 KRTAP5-2Q701N4 177 aa7.28□□□□□ -1.24
HERPUD2-205ENST00000427455 KTN1-AS1Q86SY8 53 aa7.27□□□□□ -1.25
HERPUD2-205ENST00000427455 KRTAP6-2Q3LI66 62 aa7.16□□□□□ -1.26
HERPUD2-205ENST00000427455 KRTAP5-7Q6L8G8 165 aa7.08□□□□□ -1.28
HERPUD2-205ENST00000427455 MT3P25713 68 aa6.99□□□□□ -1.29
HERPUD2-205ENST00000427455 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
HERPUD2-205ENST00000427455 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
HERPUD2-205ENST00000427455 KRTAP5-8O75690 187 aa6.72□□□□□ -1.33
HERPUD2-205ENST00000427455 OBSCNQ5VST9 7968 aa6.71□□□□□ -1.34
HERPUD2-205ENST00000427455 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
HERPUD2-205ENST00000427455 H3BS24 57 aa6.55□□□□□ -1.36
HERPUD2-205ENST00000427455 KRTAP5-1Q6L8H4 278 aa6.45□□□□□ -1.38
HERPUD2-205ENST00000427455 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
HERPUD2-205ENST00000427455 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
HERPUD2-205ENST00000427455 LCE1EQ5T753 118 aa6.33□□□□□ -1.4
HERPUD2-205ENST00000427455 MUC5BQ9HC84 5762 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-205ENST00000427455 AHNAKQ09666 5890 aaKnown RBP6.22□□□□□ -1.41
HERPUD2-205ENST00000427455 A0A0A0MQY5 61 aa6.03□□□□□ -1.44
HERPUD2-205ENST00000427455 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
HERPUD2-205ENST00000427455 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
HERPUD2-205ENST00000427455 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.46
HERPUD2-205ENST00000427455 LCE1CQ5T751 118 aa5.87□□□□□ -1.47
HERPUD2-205ENST00000427455 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
HERPUD2-205ENST00000427455 NDUFAF8A1L188 74 aa5.41□□□□□ -1.54
HERPUD2-205ENST00000427455 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.4□□□□□ -1.54
HERPUD2-205ENST00000427455 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
HERPUD2-205ENST00000427455 LCE1FQ5T754 118 aa5.05□□□□□ -1.6
HERPUD2-205ENST00000427455 KRTAP21-2Q3LI59 83 aa4.98□□□□□ -1.61
HERPUD2-205ENST00000427455 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
HERPUD2-205ENST00000427455 PRM1P04553 51 aa4.51□□□□□ -1.69
HERPUD2-205ENST00000427455 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
HERPUD2-205ENST00000427455 INE1O15225 51 aa4.42□□□□□ -1.7
HERPUD2-205ENST00000427455 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
HERPUD2-205ENST00000427455 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
HERPUD2-205ENST00000427455 MUC16Q8WXI7 14507 aa2.98□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 177.6 ms