RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
PTPN13-203ENST00000427191 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
PTPN13-203ENST00000427191 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
PTPN13-203ENST00000427191 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
PTPN13-203ENST00000427191 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
PTPN13-203ENST00000427191 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
PTPN13-203ENST00000427191 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
PTPN13-203ENST00000427191 RYR2Q92736 4967 aa4□□□□□ -1.77
PTPN13-203ENST00000427191 HERC1Q15751 4861 aa3.99□□□□□ -1.77
PTPN13-203ENST00000427191 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
PTPN13-203ENST00000427191 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
PTPN13-203ENST00000427191 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-203ENST00000427191 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
PTPN13-203ENST00000427191 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
PTPN13-203ENST00000427191 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
PTPN13-203ENST00000427191 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PTPN13-203ENST00000427191 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-203ENST00000427191 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
PTPN13-203ENST00000427191 HERC2O95714 4834 aa3.86□□□□□ -1.79
PTPN13-203ENST00000427191 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
PTPN13-203ENST00000427191 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
PTPN13-203ENST00000427191 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
PTPN13-203ENST00000427191 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
PTPN13-203ENST00000427191 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
PTPN13-203ENST00000427191 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
PTPN13-203ENST00000427191 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
PTPN13-203ENST00000427191 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
PTPN13-203ENST00000427191 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
PTPN13-203ENST00000427191 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
PTPN13-203ENST00000427191 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
PTPN13-203ENST00000427191 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
PTPN13-203ENST00000427191 EPPK1P58107 5090 aaKnown RBP3.42□□□□□ -1.86
PTPN13-203ENST00000427191 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
PTPN13-203ENST00000427191 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
PTPN13-203ENST00000427191 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
PTPN13-203ENST00000427191 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
PTPN13-203ENST00000427191 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
PTPN13-203ENST00000427191 KMT2DO14686 5537 aa3.18□□□□□ -1.9
PTPN13-203ENST00000427191 MUC2Q02817 5179 aa3.15□□□□□ -1.91
PTPN13-203ENST00000427191 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
PTPN13-203ENST00000427191 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
PTPN13-203ENST00000427191 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
PTPN13-203ENST00000427191 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
PTPN13-203ENST00000427191 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
PTPN13-203ENST00000427191 UBR4Q5T4S7 5183 aa3.01□□□□□ -1.93
PTPN13-203ENST00000427191 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
PTPN13-203ENST00000427191 NEBP20929 6669 aa2.92□□□□□ -1.94
PTPN13-203ENST00000427191 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.94
PTPN13-203ENST00000427191 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
PTPN13-203ENST00000427191 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
PTPN13-203ENST00000427191 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
PTPN13-203ENST00000427191 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.97
PTPN13-203ENST00000427191 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
PTPN13-203ENST00000427191 USH2AO75445 5202 aa2.62□□□□□ -1.99
PTPN13-203ENST00000427191 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
PTPN13-203ENST00000427191 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
PTPN13-203ENST00000427191 MDN1Q9NU22 5596 aa2.59□□□□□ -2
PTPN13-203ENST00000427191 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
PTPN13-203ENST00000427191 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
PTPN13-203ENST00000427191 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
PTPN13-203ENST00000427191 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
PTPN13-203ENST00000427191 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
PTPN13-203ENST00000427191 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
PTPN13-203ENST00000427191 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PTPN13-203ENST00000427191 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
PTPN13-203ENST00000427191 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PTPN13-203ENST00000427191 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PTPN13-203ENST00000427191 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
PTPN13-203ENST00000427191 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PTPN13-203ENST00000427191 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
PTPN13-203ENST00000427191 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
PTPN13-203ENST00000427191 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
PTPN13-203ENST00000427191 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
PTPN13-203ENST00000427191 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
PTPN13-203ENST00000427191 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
PTPN13-203ENST00000427191 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
PTPN13-203ENST00000427191 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 247.4 ms