RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
PHF1-203ENST00000427004 MT1EP04732 61 aa5.7□□□□□ -1.5
PHF1-203ENST00000427004 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
PHF1-203ENST00000427004 SPRR2DP22532 72 aa5.65□□□□□ -1.5
PHF1-203ENST00000427004 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
PHF1-203ENST00000427004 ROMO1P60602 79 aa5.55□□□□□ -1.52
PHF1-203ENST00000427004 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
PHF1-203ENST00000427004 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
PHF1-203ENST00000427004 MT1LQ93083 61 aa5.51□□□□□ -1.53
PHF1-203ENST00000427004 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
PHF1-203ENST00000427004 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
PHF1-203ENST00000427004 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
PHF1-203ENST00000427004 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
PHF1-203ENST00000427004 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
PHF1-203ENST00000427004 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
PHF1-203ENST00000427004 MT1MQ8N339 61 aa5.41□□□□□ -1.54
PHF1-203ENST00000427004 GPR98Q8WXG9 6306 aa5.39□□□□□ -1.55
PHF1-203ENST00000427004 MT1GP13640 62 aa5.39□□□□□ -1.55
PHF1-203ENST00000427004 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
PHF1-203ENST00000427004 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
PHF1-203ENST00000427004 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
PHF1-203ENST00000427004 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
PHF1-203ENST00000427004 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
PHF1-203ENST00000427004 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
PHF1-203ENST00000427004 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
PHF1-203ENST00000427004 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
PHF1-203ENST00000427004 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
PHF1-203ENST00000427004 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
PHF1-203ENST00000427004 MT4P47944 62 aa4.98□□□□□ -1.61
PHF1-203ENST00000427004 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
PHF1-203ENST00000427004 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
PHF1-203ENST00000427004 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
PHF1-203ENST00000427004 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
PHF1-203ENST00000427004 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
PHF1-203ENST00000427004 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
PHF1-203ENST00000427004 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
PHF1-203ENST00000427004 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
PHF1-203ENST00000427004 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
PHF1-203ENST00000427004 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
PHF1-203ENST00000427004 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
PHF1-203ENST00000427004 MT1AP04731 61 aa4.65□□□□□ -1.67
PHF1-203ENST00000427004 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
PHF1-203ENST00000427004 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
PHF1-203ENST00000427004 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
PHF1-203ENST00000427004 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
PHF1-203ENST00000427004 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
PHF1-203ENST00000427004 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
PHF1-203ENST00000427004 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
PHF1-203ENST00000427004 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
PHF1-203ENST00000427004 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
PHF1-203ENST00000427004 MT3P25713 68 aa4.19□□□□□ -1.74
PHF1-203ENST00000427004 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
PHF1-203ENST00000427004 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
PHF1-203ENST00000427004 H3BS24 57 aa4.13□□□□□ -1.75
PHF1-203ENST00000427004 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
PHF1-203ENST00000427004 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
PHF1-203ENST00000427004 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
PHF1-203ENST00000427004 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
PHF1-203ENST00000427004 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
PHF1-203ENST00000427004 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
PHF1-203ENST00000427004 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
PHF1-203ENST00000427004 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
PHF1-203ENST00000427004 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
PHF1-203ENST00000427004 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PHF1-203ENST00000427004 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
PHF1-203ENST00000427004 INE1O15225 51 aa3.53□□□□□ -1.84
PHF1-203ENST00000427004 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
PHF1-203ENST00000427004 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
PHF1-203ENST00000427004 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
PHF1-203ENST00000427004 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
PHF1-203ENST00000427004 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
PHF1-203ENST00000427004 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
PHF1-203ENST00000427004 PRM1P04553 51 aa2.94□□□□□ -1.94
PHF1-203ENST00000427004 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PHF1-203ENST00000427004 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
PHF1-203ENST00000427004 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
PHF1-203ENST00000427004 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PHF1-203ENST00000427004 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 108.5 ms