RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 LRP1Q07954 4544 aaKnown RBP1.08□□□□□ -2.24
R3HDM1-205ENST00000425804 MMP24-AS1A0A0U1RRL7 71 aa1.07□□□□□ -2.24
R3HDM1-205ENST00000425804 SPINK7P58062 85 aa1.06□□□□□ -2.24
R3HDM1-205ENST00000425804 C9orf92A6NGG3 77 aa1.05□□□□□ -2.24
R3HDM1-205ENST00000425804 RPL37P61927 97 aaKnown RBP1.05□□□□□ -2.24
R3HDM1-205ENST00000425804 MT1HL1P0DM35 61 aa1.04□□□□□ -2.24
R3HDM1-205ENST00000425804 KRTAP12-1P59990 96 aa1.04□□□□□ -2.24
R3HDM1-205ENST00000425804 KRTAP12-3P60328 96 aa1.04□□□□□ -2.24
R3HDM1-205ENST00000425804 LRP2P98164 4655 aa1.04□□□□□ -2.24
R3HDM1-205ENST00000425804 A0A1B0GU69 56 aa1.03□□□□□ -2.24
R3HDM1-205ENST00000425804 LPAP08519 4548 aa1.01□□□□□ -2.25
R3HDM1-205ENST00000425804 MUC17Q685J3 4493 aa1□□□□□ -2.25
R3HDM1-205ENST00000425804 MUC2Q02817 5179 aa1□□□□□ -2.25
R3HDM1-205ENST00000425804 FAT4Q6V0I7 4981 aa0.99□□□□□ -2.25
R3HDM1-205ENST00000425804 COX6B2Q6YFQ2 88 aa0.99□□□□□ -2.25
R3HDM1-205ENST00000425804 KRTAP6-3Q3LI67 103 aa0.98□□□□□ -2.25
R3HDM1-205ENST00000425804 H1FX-AS1Q4G0G2 97 aa0.98□□□□□ -2.25
R3HDM1-205ENST00000425804 S4R3F8 94 aa0.98□□□□□ -2.25
R3HDM1-205ENST00000425804 FLGP20930 4061 aaPredicted RBP0.96□□□□□ -2.26
R3HDM1-205ENST00000425804 M0R2T5 61 aa0.94□□□□□ -2.26
R3HDM1-205ENST00000425804 CRIPTQ9P021 101 aa0.94□□□□□ -2.26
R3HDM1-205ENST00000425804 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
R3HDM1-205ENST00000425804 H0YAA0 97 aa0.93□□□□□ -2.26
R3HDM1-205ENST00000425804 M0QZ58 72 aa0.92□□□□□ -2.26
R3HDM1-205ENST00000425804 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
R3HDM1-205ENST00000425804 USH2AO75445 5202 aa0.9□□□□□ -2.26
R3HDM1-205ENST00000425804 MT1HP80294 61 aa0.89□□□□□ -2.27
R3HDM1-205ENST00000425804 C10orf95Q9H7T3 257 aa0.89□□□□□ -2.27
R3HDM1-205ENST00000425804 SSPOA2VEC9 5147 aa0.89□□□□□ -2.27
R3HDM1-205ENST00000425804 A0A0D9SG42 100 aa0.86□□□□□ -2.27
R3HDM1-205ENST00000425804 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
R3HDM1-205ENST00000425804 MT2AP02795 61 aa0.85□□□□□ -2.27
R3HDM1-205ENST00000425804 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
R3HDM1-205ENST00000425804 MT1FP04733 61 aa0.84□□□□□ -2.27
R3HDM1-205ENST00000425804 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
R3HDM1-205ENST00000425804 TNP1P09430 55 aa0.82□□□□□ -2.28
R3HDM1-205ENST00000425804 KRTAP19-8Q3LI54 63 aa0.82□□□□□ -2.28
R3HDM1-205ENST00000425804 SYNE2Q8WXH0 6885 aaKnown RBP0.82□□□□□ -2.28
R3HDM1-205ENST00000425804 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
R3HDM1-205ENST00000425804 NEBP20929 6669 aa0.8□□□□□ -2.28
R3HDM1-205ENST00000425804 MACF1Q9UPN3 7388 aaKnown RBP0.8□□□□□ -2.28
R3HDM1-205ENST00000425804 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.28
R3HDM1-205ENST00000425804 MT1BP07438 61 aa0.78□□□□□ -2.28
R3HDM1-205ENST00000425804 MT1XP80297 61 aa0.77□□□□□ -2.29
R3HDM1-205ENST00000425804 KRTAP19-6Q3LI70 58 aa0.77□□□□□ -2.29
R3HDM1-205ENST00000425804 KMT2DO14686 5537 aa0.75□□□□□ -2.29
R3HDM1-205ENST00000425804 MDN1Q9NU22 5596 aa0.74□□□□□ -2.29
R3HDM1-205ENST00000425804 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
R3HDM1-205ENST00000425804 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
R3HDM1-205ENST00000425804 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
R3HDM1-205ENST00000425804 SPRR2EP22531 72 aa0.69□□□□□ -2.3
R3HDM1-205ENST00000425804 SPRR2BP35325 72 aa0.69□□□□□ -2.3
R3HDM1-205ENST00000425804 SPRR2AP35326 72 aa0.69□□□□□ -2.3
R3HDM1-205ENST00000425804 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
R3HDM1-205ENST00000425804 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
R3HDM1-205ENST00000425804 MT1EP04732 61 aa0.68□□□□□ -2.3
R3HDM1-205ENST00000425804 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
R3HDM1-205ENST00000425804 MT1GP13640 62 aa0.67□□□□□ -2.3
R3HDM1-205ENST00000425804 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
R3HDM1-205ENST00000425804 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
R3HDM1-205ENST00000425804 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
R3HDM1-205ENST00000425804 SPRR2DP22532 72 aa0.66□□□□□ -2.3
R3HDM1-205ENST00000425804 MT1LQ93083 61 aa0.66□□□□□ -2.3
R3HDM1-205ENST00000425804 MT1MQ8N339 61 aa0.64□□□□□ -2.31
R3HDM1-205ENST00000425804 KRTAP2-1Q9BYU5 128 aa0.64□□□□□ -2.31
R3HDM1-205ENST00000425804 DSTQ03001 7570 aaKnown RBP0.62□□□□□ -2.31
R3HDM1-205ENST00000425804 MT4P47944 62 aa0.61□□□□□ -2.31
R3HDM1-205ENST00000425804 MT1AP04731 61 aa0.58□□□□□ -2.32
R3HDM1-205ENST00000425804 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
R3HDM1-205ENST00000425804 KRTAP20-2Q3LI61 65 aa0.54□□□□□ -2.32
R3HDM1-205ENST00000425804 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
R3HDM1-205ENST00000425804 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
R3HDM1-205ENST00000425804 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
R3HDM1-205ENST00000425804 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
R3HDM1-205ENST00000425804 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
R3HDM1-205ENST00000425804 PRM1P04553 51 aa0.49□□□□□ -2.33
R3HDM1-205ENST00000425804 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
R3HDM1-205ENST00000425804 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 871.7 ms