RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
NUP50-207ENST00000424634 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
NUP50-207ENST00000424634 MT4P47944 62 aa6.39□□□□□ -1.39
NUP50-207ENST00000424634 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
NUP50-207ENST00000424634 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
NUP50-207ENST00000424634 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
NUP50-207ENST00000424634 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
NUP50-207ENST00000424634 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
NUP50-207ENST00000424634 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
NUP50-207ENST00000424634 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
NUP50-207ENST00000424634 UQCR11O14957 56 aa6.22□□□□□ -1.41
NUP50-207ENST00000424634 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.42
NUP50-207ENST00000424634 TMEM258P61165 79 aa6.18□□□□□ -1.42
NUP50-207ENST00000424634 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
NUP50-207ENST00000424634 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
NUP50-207ENST00000424634 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
NUP50-207ENST00000424634 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
NUP50-207ENST00000424634 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
NUP50-207ENST00000424634 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
NUP50-207ENST00000424634 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
NUP50-207ENST00000424634 K7ERS5 55 aa5.93□□□□□ -1.46
NUP50-207ENST00000424634 PSPHP1O15172 72 aa5.93□□□□□ -1.46
NUP50-207ENST00000424634 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
NUP50-207ENST00000424634 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
NUP50-207ENST00000424634 Q1T7F1 81 aa5.87□□□□□ -1.47
NUP50-207ENST00000424634 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
NUP50-207ENST00000424634 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
NUP50-207ENST00000424634 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
NUP50-207ENST00000424634 V9GYY9 64 aa5.86□□□□□ -1.47
NUP50-207ENST00000424634 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
NUP50-207ENST00000424634 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
NUP50-207ENST00000424634 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
NUP50-207ENST00000424634 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
NUP50-207ENST00000424634 A6NED7 52 aa5.68□□□□□ -1.5
NUP50-207ENST00000424634 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
NUP50-207ENST00000424634 KRTAP6-1Q3LI64 71 aa5.58□□□□□ -1.52
NUP50-207ENST00000424634 MT1AP04731 61 aa5.57□□□□□ -1.52
NUP50-207ENST00000424634 ROMO1P60602 79 aa5.56□□□□□ -1.52
NUP50-207ENST00000424634 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
NUP50-207ENST00000424634 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
NUP50-207ENST00000424634 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
NUP50-207ENST00000424634 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
NUP50-207ENST00000424634 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
NUP50-207ENST00000424634 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
NUP50-207ENST00000424634 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
NUP50-207ENST00000424634 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
NUP50-207ENST00000424634 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
NUP50-207ENST00000424634 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
NUP50-207ENST00000424634 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
NUP50-207ENST00000424634 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
NUP50-207ENST00000424634 MUC5ACP98088 5654 aa5.09□□□□□ -1.59
NUP50-207ENST00000424634 MT3P25713 68 aa5.09□□□□□ -1.59
NUP50-207ENST00000424634 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
NUP50-207ENST00000424634 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
NUP50-207ENST00000424634 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
NUP50-207ENST00000424634 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
NUP50-207ENST00000424634 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
NUP50-207ENST00000424634 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
NUP50-207ENST00000424634 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
NUP50-207ENST00000424634 H3BS24 57 aa4.39□□□□□ -1.71
NUP50-207ENST00000424634 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
NUP50-207ENST00000424634 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
NUP50-207ENST00000424634 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
NUP50-207ENST00000424634 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
NUP50-207ENST00000424634 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
NUP50-207ENST00000424634 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
NUP50-207ENST00000424634 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
NUP50-207ENST00000424634 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
NUP50-207ENST00000424634 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
NUP50-207ENST00000424634 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
NUP50-207ENST00000424634 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
NUP50-207ENST00000424634 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
NUP50-207ENST00000424634 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
NUP50-207ENST00000424634 INE1O15225 51 aa3.39□□□□□ -1.87
NUP50-207ENST00000424634 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
NUP50-207ENST00000424634 PRM1P04553 51 aa2.85□□□□□ -1.95
NUP50-207ENST00000424634 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
NUP50-207ENST00000424634 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 68.6 ms