RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
VPS8-204ENST00000424463 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
VPS8-204ENST00000424463 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
VPS8-204ENST00000424463 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
VPS8-204ENST00000424463 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
VPS8-204ENST00000424463 KMT2DO14686 5537 aa3.19□□□□□ -1.9
VPS8-204ENST00000424463 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
VPS8-204ENST00000424463 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
VPS8-204ENST00000424463 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.9
VPS8-204ENST00000424463 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
VPS8-204ENST00000424463 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
VPS8-204ENST00000424463 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
VPS8-204ENST00000424463 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
VPS8-204ENST00000424463 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
VPS8-204ENST00000424463 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
VPS8-204ENST00000424463 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.92
VPS8-204ENST00000424463 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
VPS8-204ENST00000424463 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
VPS8-204ENST00000424463 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
VPS8-204ENST00000424463 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
VPS8-204ENST00000424463 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
VPS8-204ENST00000424463 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
VPS8-204ENST00000424463 MT1EP04732 61 aa2.9□□□□□ -1.94
VPS8-204ENST00000424463 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.95
VPS8-204ENST00000424463 MT1LQ93083 61 aa2.88□□□□□ -1.95
VPS8-204ENST00000424463 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
VPS8-204ENST00000424463 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
VPS8-204ENST00000424463 CRCT1Q9UGL9 99 aa2.8□□□□□ -1.96
VPS8-204ENST00000424463 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
VPS8-204ENST00000424463 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.97
VPS8-204ENST00000424463 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.97
VPS8-204ENST00000424463 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
VPS8-204ENST00000424463 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
VPS8-204ENST00000424463 MT1GP13640 62 aa2.73□□□□□ -1.97
VPS8-204ENST00000424463 MT1MQ8N339 61 aa2.73□□□□□ -1.97
VPS8-204ENST00000424463 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
VPS8-204ENST00000424463 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
VPS8-204ENST00000424463 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
VPS8-204ENST00000424463 SPRR2EP22531 72 aa2.59□□□□□ -2
VPS8-204ENST00000424463 SPRR2BP35325 72 aa2.59□□□□□ -2
VPS8-204ENST00000424463 SPRR2AP35326 72 aa2.59□□□□□ -2
VPS8-204ENST00000424463 MT3P25713 68 aa2.58□□□□□ -2
VPS8-204ENST00000424463 PRM1P04553 51 aa2.57□□□□□ -2
VPS8-204ENST00000424463 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
VPS8-204ENST00000424463 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
VPS8-204ENST00000424463 SPRR2DP22532 72 aa2.48□□□□□ -2.01
VPS8-204ENST00000424463 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
VPS8-204ENST00000424463 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
VPS8-204ENST00000424463 NEBP20929 6669 aa2.41□□□□□ -2.02
VPS8-204ENST00000424463 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
VPS8-204ENST00000424463 MT1AP04731 61 aa2.41□□□□□ -2.02
VPS8-204ENST00000424463 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
VPS8-204ENST00000424463 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
VPS8-204ENST00000424463 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
VPS8-204ENST00000424463 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
VPS8-204ENST00000424463 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
VPS8-204ENST00000424463 MT4P47944 62 aa2.2□□□□□ -2.06
VPS8-204ENST00000424463 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
VPS8-204ENST00000424463 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
VPS8-204ENST00000424463 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
VPS8-204ENST00000424463 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
VPS8-204ENST00000424463 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
VPS8-204ENST00000424463 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
VPS8-204ENST00000424463 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
VPS8-204ENST00000424463 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
VPS8-204ENST00000424463 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
VPS8-204ENST00000424463 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
VPS8-204ENST00000424463 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
VPS8-204ENST00000424463 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
VPS8-204ENST00000424463 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
VPS8-204ENST00000424463 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
VPS8-204ENST00000424463 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
VPS8-204ENST00000424463 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
VPS8-204ENST00000424463 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.14
VPS8-204ENST00000424463 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
VPS8-204ENST00000424463 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
VPS8-204ENST00000424463 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 106.8 ms