RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 MT4P47944 62 aa2.78□□□□□ -1.96
CHD7-201ENST00000423902 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
CHD7-201ENST00000423902 RNF213Q63HN8 5207 aa2.78□□□□□ -1.96
CHD7-201ENST00000423902 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
CHD7-201ENST00000423902 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
CHD7-201ENST00000423902 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
CHD7-201ENST00000423902 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
CHD7-201ENST00000423902 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
CHD7-201ENST00000423902 MT1MQ8N339 61 aa2.72□□□□□ -1.97
CHD7-201ENST00000423902 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
CHD7-201ENST00000423902 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
CHD7-201ENST00000423902 FSIP2Q5CZC0 6907 aa2.69□□□□□ -1.98
CHD7-201ENST00000423902 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
CHD7-201ENST00000423902 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.99
CHD7-201ENST00000423902 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CHD7-201ENST00000423902 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
CHD7-201ENST00000423902 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
CHD7-201ENST00000423902 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
CHD7-201ENST00000423902 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
CHD7-201ENST00000423902 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
CHD7-201ENST00000423902 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
CHD7-201ENST00000423902 LCE1DQ5T752 114 aa2.51□□□□□ -2.01
CHD7-201ENST00000423902 NEBP20929 6669 aa2.5□□□□□ -2.01
CHD7-201ENST00000423902 MUC2Q02817 5179 aa2.5□□□□□ -2.01
CHD7-201ENST00000423902 MT1AP04731 61 aa2.49□□□□□ -2.01
CHD7-201ENST00000423902 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
CHD7-201ENST00000423902 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
CHD7-201ENST00000423902 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
CHD7-201ENST00000423902 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CHD7-201ENST00000423902 KRTAP4-9Q9BYQ8 210 aa2.42□□□□□ -2.02
CHD7-201ENST00000423902 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
CHD7-201ENST00000423902 KRTAP9-4Q9BYQ2 154 aa2.35□□□□□ -2.03
CHD7-201ENST00000423902 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
CHD7-201ENST00000423902 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
CHD7-201ENST00000423902 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
CHD7-201ENST00000423902 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
CHD7-201ENST00000423902 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
CHD7-201ENST00000423902 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
CHD7-201ENST00000423902 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
CHD7-201ENST00000423902 USH2AO75445 5202 aa2.22□□□□□ -2.05
CHD7-201ENST00000423902 PRM1P04553 51 aa2.21□□□□□ -2.06
CHD7-201ENST00000423902 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
CHD7-201ENST00000423902 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
CHD7-201ENST00000423902 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
CHD7-201ENST00000423902 KMT2DO14686 5537 aa2.17□□□□□ -2.06
CHD7-201ENST00000423902 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
CHD7-201ENST00000423902 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.08
CHD7-201ENST00000423902 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
CHD7-201ENST00000423902 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
CHD7-201ENST00000423902 KRTAP4-6Q9BYQ5 205 aa2.08□□□□□ -2.08
CHD7-201ENST00000423902 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
CHD7-201ENST00000423902 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
CHD7-201ENST00000423902 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
CHD7-201ENST00000423902 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
CHD7-201ENST00000423902 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
CHD7-201ENST00000423902 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
CHD7-201ENST00000423902 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
CHD7-201ENST00000423902 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
CHD7-201ENST00000423902 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
CHD7-201ENST00000423902 KRTAP4-2Q9BYR5 136 aa1.71□□□□□ -2.14
CHD7-201ENST00000423902 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
CHD7-201ENST00000423902 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
CHD7-201ENST00000423902 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CHD7-201ENST00000423902 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
CHD7-201ENST00000423902 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
CHD7-201ENST00000423902 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
CHD7-201ENST00000423902 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
CHD7-201ENST00000423902 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
CHD7-201ENST00000423902 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
CHD7-201ENST00000423902 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
CHD7-201ENST00000423902 KRTAP5-11Q6L8G4 156 aa1.39□□□□□ -2.19
CHD7-201ENST00000423902 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
CHD7-201ENST00000423902 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
CHD7-201ENST00000423902 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
CHD7-201ENST00000423902 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
CHD7-201ENST00000423902 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
CHD7-201ENST00000423902 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 61.8 ms