RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 MT1GP13640 62 aa4.6□□□□□ -1.67
CDCA3-202ENST00000422785 MT1MQ8N339 61 aa4.58□□□□□ -1.68
CDCA3-202ENST00000422785 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
CDCA3-202ENST00000422785 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
CDCA3-202ENST00000422785 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
CDCA3-202ENST00000422785 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
CDCA3-202ENST00000422785 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
CDCA3-202ENST00000422785 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
CDCA3-202ENST00000422785 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
CDCA3-202ENST00000422785 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
CDCA3-202ENST00000422785 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
CDCA3-202ENST00000422785 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
CDCA3-202ENST00000422785 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
CDCA3-202ENST00000422785 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
CDCA3-202ENST00000422785 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
CDCA3-202ENST00000422785 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
CDCA3-202ENST00000422785 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
CDCA3-202ENST00000422785 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
CDCA3-202ENST00000422785 SPRR2EP22531 72 aa4.2□□□□□ -1.74
CDCA3-202ENST00000422785 SPRR2BP35325 72 aa4.2□□□□□ -1.74
CDCA3-202ENST00000422785 SPRR2AP35326 72 aa4.2□□□□□ -1.74
CDCA3-202ENST00000422785 MT1AP04731 61 aa4.1□□□□□ -1.75
CDCA3-202ENST00000422785 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
CDCA3-202ENST00000422785 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CDCA3-202ENST00000422785 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
CDCA3-202ENST00000422785 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
CDCA3-202ENST00000422785 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
CDCA3-202ENST00000422785 SPRR2DP22532 72 aa4.03□□□□□ -1.76
CDCA3-202ENST00000422785 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
CDCA3-202ENST00000422785 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
CDCA3-202ENST00000422785 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
CDCA3-202ENST00000422785 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
CDCA3-202ENST00000422785 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
CDCA3-202ENST00000422785 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
CDCA3-202ENST00000422785 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
CDCA3-202ENST00000422785 NEBP20929 6669 aa3.74□□□□□ -1.81
CDCA3-202ENST00000422785 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
CDCA3-202ENST00000422785 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
CDCA3-202ENST00000422785 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
CDCA3-202ENST00000422785 MT3P25713 68 aa3.69□□□□□ -1.82
CDCA3-202ENST00000422785 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
CDCA3-202ENST00000422785 PRM1P04553 51 aa3.62□□□□□ -1.83
CDCA3-202ENST00000422785 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
CDCA3-202ENST00000422785 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
CDCA3-202ENST00000422785 MT4P47944 62 aa3.51□□□□□ -1.85
CDCA3-202ENST00000422785 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
CDCA3-202ENST00000422785 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
CDCA3-202ENST00000422785 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
CDCA3-202ENST00000422785 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
CDCA3-202ENST00000422785 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
CDCA3-202ENST00000422785 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
CDCA3-202ENST00000422785 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
CDCA3-202ENST00000422785 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
CDCA3-202ENST00000422785 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CDCA3-202ENST00000422785 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
CDCA3-202ENST00000422785 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CDCA3-202ENST00000422785 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
CDCA3-202ENST00000422785 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CDCA3-202ENST00000422785 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
CDCA3-202ENST00000422785 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CDCA3-202ENST00000422785 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
CDCA3-202ENST00000422785 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CDCA3-202ENST00000422785 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
CDCA3-202ENST00000422785 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
CDCA3-202ENST00000422785 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CDCA3-202ENST00000422785 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CDCA3-202ENST00000422785 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CDCA3-202ENST00000422785 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
CDCA3-202ENST00000422785 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
CDCA3-202ENST00000422785 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CDCA3-202ENST00000422785 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CDCA3-202ENST00000422785 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
CDCA3-202ENST00000422785 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
CDCA3-202ENST00000422785 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
CDCA3-202ENST00000422785 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CDCA3-202ENST00000422785 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
CDCA3-202ENST00000422785 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 65.3 ms