RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.7
CALD1-205ENST00000422748 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.71
CALD1-205ENST00000422748 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
CALD1-205ENST00000422748 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
CALD1-205ENST00000422748 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
CALD1-205ENST00000422748 MT1LQ93083 61 aa4.33□□□□□ -1.72
CALD1-205ENST00000422748 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
CALD1-205ENST00000422748 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
CALD1-205ENST00000422748 MT1EP04732 61 aa4.24□□□□□ -1.73
CALD1-205ENST00000422748 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
CALD1-205ENST00000422748 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
CALD1-205ENST00000422748 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
CALD1-205ENST00000422748 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
CALD1-205ENST00000422748 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
CALD1-205ENST00000422748 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
CALD1-205ENST00000422748 MT1GP13640 62 aa4.13□□□□□ -1.75
CALD1-205ENST00000422748 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
CALD1-205ENST00000422748 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
CALD1-205ENST00000422748 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
CALD1-205ENST00000422748 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
CALD1-205ENST00000422748 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
CALD1-205ENST00000422748 MT1MQ8N339 61 aa3.94□□□□□ -1.78
CALD1-205ENST00000422748 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
CALD1-205ENST00000422748 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
CALD1-205ENST00000422748 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
CALD1-205ENST00000422748 PRM1P04553 51 aa3.92□□□□□ -1.78
CALD1-205ENST00000422748 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
CALD1-205ENST00000422748 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
CALD1-205ENST00000422748 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
CALD1-205ENST00000422748 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
CALD1-205ENST00000422748 MT1AP04731 61 aa3.85□□□□□ -1.79
CALD1-205ENST00000422748 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
CALD1-205ENST00000422748 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CALD1-205ENST00000422748 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
CALD1-205ENST00000422748 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
CALD1-205ENST00000422748 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
CALD1-205ENST00000422748 MT3P25713 68 aa3.78□□□□□ -1.8
CALD1-205ENST00000422748 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
CALD1-205ENST00000422748 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
CALD1-205ENST00000422748 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
CALD1-205ENST00000422748 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
CALD1-205ENST00000422748 SPRR2EP22531 72 aa3.65□□□□□ -1.83
CALD1-205ENST00000422748 SPRR2BP35325 72 aa3.65□□□□□ -1.83
CALD1-205ENST00000422748 SPRR2AP35326 72 aa3.65□□□□□ -1.83
CALD1-205ENST00000422748 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
CALD1-205ENST00000422748 SPRR2DP22532 72 aa3.5□□□□□ -1.85
CALD1-205ENST00000422748 NEBP20929 6669 aa3.49□□□□□ -1.85
CALD1-205ENST00000422748 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
CALD1-205ENST00000422748 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
CALD1-205ENST00000422748 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CALD1-205ENST00000422748 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
CALD1-205ENST00000422748 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CALD1-205ENST00000422748 MT4P47944 62 aa3.06□□□□□ -1.92
CALD1-205ENST00000422748 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
CALD1-205ENST00000422748 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
CALD1-205ENST00000422748 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
CALD1-205ENST00000422748 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CALD1-205ENST00000422748 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
CALD1-205ENST00000422748 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CALD1-205ENST00000422748 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CALD1-205ENST00000422748 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
CALD1-205ENST00000422748 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CALD1-205ENST00000422748 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
CALD1-205ENST00000422748 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CALD1-205ENST00000422748 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
CALD1-205ENST00000422748 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
CALD1-205ENST00000422748 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CALD1-205ENST00000422748 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
CALD1-205ENST00000422748 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
CALD1-205ENST00000422748 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CALD1-205ENST00000422748 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CALD1-205ENST00000422748 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
CALD1-205ENST00000422748 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
CALD1-205ENST00000422748 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
CALD1-205ENST00000422748 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
CALD1-205ENST00000422748 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CALD1-205ENST00000422748 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 144.7 ms