RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 KRTAP2-4Q9BYR9 128 aa8.69□□□□□ -1.02
ITGA9-203ENST00000422441 KRTAP2-1Q9BYU5 128 aa8.69□□□□□ -1.02
ITGA9-203ENST00000422441 FCGBPQ9Y6R7 5405 aaPredicted RBP8.57□□□□□ -1.04
ITGA9-203ENST00000422441 KRTAP4-3Q9BYR4 195 aa8.5□□□□□ -1.05
ITGA9-203ENST00000422441 KRTAP19-3Q7Z4W3 81 aa8.47□□□□□ -1.05
ITGA9-203ENST00000422441 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
ITGA9-203ENST00000422441 MT1MQ8N339 61 aa8.45□□□□□ -1.06
ITGA9-203ENST00000422441 MT1GP13640 62 aa8.43□□□□□ -1.06
ITGA9-203ENST00000422441 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
ITGA9-203ENST00000422441 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
ITGA9-203ENST00000422441 LCE5AQ5TCM9 118 aa8.22□□□□□ -1.09
ITGA9-203ENST00000422441 SPRR2FQ96RM1 72 aa8.22□□□□□ -1.09
ITGA9-203ENST00000422441 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
ITGA9-203ENST00000422441 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
ITGA9-203ENST00000422441 DSTQ03001 7570 aaKnown RBP7.98□□□□□ -1.13
ITGA9-203ENST00000422441 SYNE2Q8WXH0 6885 aaKnown RBP7.93□□□□□ -1.14
ITGA9-203ENST00000422441 KRTAP5-9P26371 169 aa7.74□□□□□ -1.17
ITGA9-203ENST00000422441 MDN1Q9NU22 5596 aa7.74□□□□□ -1.17
ITGA9-203ENST00000422441 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.73□□□□□ -1.17
ITGA9-203ENST00000422441 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
ITGA9-203ENST00000422441 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
ITGA9-203ENST00000422441 KRTAP6-1Q3LI64 71 aa7.62□□□□□ -1.19
ITGA9-203ENST00000422441 KRTAP12-4P60329 112 aa7.61□□□□□ -1.19
ITGA9-203ENST00000422441 MT1AP04731 61 aa7.57□□□□□ -1.2
ITGA9-203ENST00000422441 SPRR2EP22531 72 aa7.53□□□□□ -1.2
ITGA9-203ENST00000422441 SPRR2BP35325 72 aa7.53□□□□□ -1.2
ITGA9-203ENST00000422441 SPRR2AP35326 72 aa7.53□□□□□ -1.2
ITGA9-203ENST00000422441 KRTAP5-5Q701N2 237 aaPredicted RBP7.51□□□□□ -1.21
ITGA9-203ENST00000422441 KRTAP4-9Q9BYQ8 210 aa7.48□□□□□ -1.21
ITGA9-203ENST00000422441 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
ITGA9-203ENST00000422441 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
ITGA9-203ENST00000422441 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
ITGA9-203ENST00000422441 LCE3DQ9BYE3 92 aa7.21□□□□□ -1.25
ITGA9-203ENST00000422441 SPRR2DP22532 72 aa7.2□□□□□ -1.26
ITGA9-203ENST00000422441 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.26
ITGA9-203ENST00000422441 LCE3EQ5T5B0 92 aa7.11□□□□□ -1.27
ITGA9-203ENST00000422441 NEBP20929 6669 aa7.02□□□□□ -1.29
ITGA9-203ENST00000422441 KRTAP6-2Q3LI66 62 aa6.86□□□□□ -1.31
ITGA9-203ENST00000422441 MT3P25713 68 aa6.8□□□□□ -1.32
ITGA9-203ENST00000422441 PRM1P04553 51 aa6.7□□□□□ -1.34
ITGA9-203ENST00000422441 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
ITGA9-203ENST00000422441 KRTAP20-1Q3LI63 56 aa6.58□□□□□ -1.36
ITGA9-203ENST00000422441 OBSCNQ5VST9 7968 aa6.57□□□□□ -1.36
ITGA9-203ENST00000422441 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
ITGA9-203ENST00000422441 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
ITGA9-203ENST00000422441 MT4P47944 62 aa6.33□□□□□ -1.4
ITGA9-203ENST00000422441 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
ITGA9-203ENST00000422441 KRTAP20-2Q3LI61 65 aa6.26□□□□□ -1.41
ITGA9-203ENST00000422441 KRTAP5-2Q701N4 177 aa6.23□□□□□ -1.41
ITGA9-203ENST00000422441 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
ITGA9-203ENST00000422441 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
ITGA9-203ENST00000422441 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
ITGA9-203ENST00000422441 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
ITGA9-203ENST00000422441 LCE1EQ5T753 118 aa5.63□□□□□ -1.51
ITGA9-203ENST00000422441 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
ITGA9-203ENST00000422441 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
ITGA9-203ENST00000422441 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
ITGA9-203ENST00000422441 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
ITGA9-203ENST00000422441 LCE1CQ5T751 118 aa5.3□□□□□ -1.56
ITGA9-203ENST00000422441 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
ITGA9-203ENST00000422441 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
ITGA9-203ENST00000422441 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
ITGA9-203ENST00000422441 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.02□□□□□ -1.61
ITGA9-203ENST00000422441 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
ITGA9-203ENST00000422441 KRTAP21-2Q3LI59 83 aa4.95□□□□□ -1.62
ITGA9-203ENST00000422441 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
ITGA9-203ENST00000422441 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
ITGA9-203ENST00000422441 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
ITGA9-203ENST00000422441 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
ITGA9-203ENST00000422441 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
ITGA9-203ENST00000422441 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
ITGA9-203ENST00000422441 KRTAP21-1Q3LI58 79 aa4.22□□□□□ -1.73
ITGA9-203ENST00000422441 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
ITGA9-203ENST00000422441 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
ITGA9-203ENST00000422441 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
ITGA9-203ENST00000422441 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
ITGA9-203ENST00000422441 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms