RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
PTCH1-206ENST00000421141 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
PTCH1-206ENST00000421141 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
PTCH1-206ENST00000421141 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
PTCH1-206ENST00000421141 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
PTCH1-206ENST00000421141 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.88
PTCH1-206ENST00000421141 MT3P25713 68 aa3.34□□□□□ -1.88
PTCH1-206ENST00000421141 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
PTCH1-206ENST00000421141 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
PTCH1-206ENST00000421141 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
PTCH1-206ENST00000421141 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
PTCH1-206ENST00000421141 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
PTCH1-206ENST00000421141 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
PTCH1-206ENST00000421141 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
PTCH1-206ENST00000421141 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
PTCH1-206ENST00000421141 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
PTCH1-206ENST00000421141 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
PTCH1-206ENST00000421141 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
PTCH1-206ENST00000421141 MUC2Q02817 5179 aa3.2□□□□□ -1.9
PTCH1-206ENST00000421141 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
PTCH1-206ENST00000421141 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
PTCH1-206ENST00000421141 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
PTCH1-206ENST00000421141 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
PTCH1-206ENST00000421141 MT1AP04731 61 aa3.15□□□□□ -1.91
PTCH1-206ENST00000421141 RNF213Q63HN8 5207 aa3.15□□□□□ -1.91
PTCH1-206ENST00000421141 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
PTCH1-206ENST00000421141 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
PTCH1-206ENST00000421141 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
PTCH1-206ENST00000421141 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
PTCH1-206ENST00000421141 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
PTCH1-206ENST00000421141 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
PTCH1-206ENST00000421141 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
PTCH1-206ENST00000421141 PRM1P04553 51 aa2.93□□□□□ -1.94
PTCH1-206ENST00000421141 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
PTCH1-206ENST00000421141 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
PTCH1-206ENST00000421141 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
PTCH1-206ENST00000421141 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
PTCH1-206ENST00000421141 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
PTCH1-206ENST00000421141 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
PTCH1-206ENST00000421141 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
PTCH1-206ENST00000421141 KMT2DO14686 5537 aa2.76□□□□□ -1.97
PTCH1-206ENST00000421141 NEBP20929 6669 aa2.72□□□□□ -1.97
PTCH1-206ENST00000421141 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.98
PTCH1-206ENST00000421141 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-206ENST00000421141 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
PTCH1-206ENST00000421141 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -2
PTCH1-206ENST00000421141 SSPOA2VEC9 5147 aa2.57□□□□□ -2
PTCH1-206ENST00000421141 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
PTCH1-206ENST00000421141 USH2AO75445 5202 aa2.53□□□□□ -2
PTCH1-206ENST00000421141 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
PTCH1-206ENST00000421141 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
PTCH1-206ENST00000421141 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
PTCH1-206ENST00000421141 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
PTCH1-206ENST00000421141 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
PTCH1-206ENST00000421141 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
PTCH1-206ENST00000421141 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
PTCH1-206ENST00000421141 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
PTCH1-206ENST00000421141 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
PTCH1-206ENST00000421141 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
PTCH1-206ENST00000421141 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.09
PTCH1-206ENST00000421141 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
PTCH1-206ENST00000421141 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
PTCH1-206ENST00000421141 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
PTCH1-206ENST00000421141 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
PTCH1-206ENST00000421141 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
PTCH1-206ENST00000421141 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
PTCH1-206ENST00000421141 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
PTCH1-206ENST00000421141 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
PTCH1-206ENST00000421141 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
PTCH1-206ENST00000421141 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
PTCH1-206ENST00000421141 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
PTCH1-206ENST00000421141 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
PTCH1-206ENST00000421141 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
PTCH1-206ENST00000421141 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
PTCH1-206ENST00000421141 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
PTCH1-206ENST00000421141 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
PTCH1-206ENST00000421141 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 156.6 ms