RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 LCE5AQ5TCM9 118 aa7.48□□□□□ -1.21
HMGXB4-203ENST00000420166 MT1LQ93083 61 aa7.38□□□□□ -1.23
HMGXB4-203ENST00000420166 MT1GP13640 62 aa7.37□□□□□ -1.23
HMGXB4-203ENST00000420166 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
HMGXB4-203ENST00000420166 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
HMGXB4-203ENST00000420166 ROMO1P60602 79 aa7.34□□□□□ -1.23
HMGXB4-203ENST00000420166 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
HMGXB4-203ENST00000420166 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
HMGXB4-203ENST00000420166 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
HMGXB4-203ENST00000420166 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
HMGXB4-203ENST00000420166 MT1MQ8N339 61 aa7.26□□□□□ -1.25
HMGXB4-203ENST00000420166 BRK1Q8WUW1 75 aa7.13□□□□□ -1.27
HMGXB4-203ENST00000420166 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-203ENST00000420166 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
HMGXB4-203ENST00000420166 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
HMGXB4-203ENST00000420166 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
HMGXB4-203ENST00000420166 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
HMGXB4-203ENST00000420166 GPR98Q8WXG9 6306 aa7.03□□□□□ -1.28
HMGXB4-203ENST00000420166 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
HMGXB4-203ENST00000420166 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
HMGXB4-203ENST00000420166 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
HMGXB4-203ENST00000420166 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
HMGXB4-203ENST00000420166 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
HMGXB4-203ENST00000420166 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
HMGXB4-203ENST00000420166 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
HMGXB4-203ENST00000420166 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
HMGXB4-203ENST00000420166 MT4P47944 62 aa6.62□□□□□ -1.35
HMGXB4-203ENST00000420166 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-203ENST00000420166 PRO0628Q9UI54 55 aa6.53□□□□□ -1.36
HMGXB4-203ENST00000420166 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
HMGXB4-203ENST00000420166 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
HMGXB4-203ENST00000420166 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
HMGXB4-203ENST00000420166 AHNAK2Q8IVF2 5795 aa6.38□□□□□ -1.39
HMGXB4-203ENST00000420166 KRTAP12-4P60329 112 aa6.35□□□□□ -1.39
HMGXB4-203ENST00000420166 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
HMGXB4-203ENST00000420166 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
HMGXB4-203ENST00000420166 MT1AP04731 61 aa6.29□□□□□ -1.4
HMGXB4-203ENST00000420166 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
HMGXB4-203ENST00000420166 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
HMGXB4-203ENST00000420166 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-203ENST00000420166 KRTAP5-10Q6L8G5 202 aa6.22□□□□□ -1.41
HMGXB4-203ENST00000420166 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
HMGXB4-203ENST00000420166 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
HMGXB4-203ENST00000420166 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
HMGXB4-203ENST00000420166 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.43
HMGXB4-203ENST00000420166 KRTAP5-7Q6L8G8 165 aa6.01□□□□□ -1.45
HMGXB4-203ENST00000420166 KRTAP5-2Q701N4 177 aa5.94□□□□□ -1.46
HMGXB4-203ENST00000420166 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
HMGXB4-203ENST00000420166 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
HMGXB4-203ENST00000420166 H3BS24 57 aa5.84□□□□□ -1.47
HMGXB4-203ENST00000420166 MT3P25713 68 aa5.73□□□□□ -1.49
HMGXB4-203ENST00000420166 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
HMGXB4-203ENST00000420166 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
HMGXB4-203ENST00000420166 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
HMGXB4-203ENST00000420166 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
HMGXB4-203ENST00000420166 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
HMGXB4-203ENST00000420166 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
HMGXB4-203ENST00000420166 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
HMGXB4-203ENST00000420166 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
HMGXB4-203ENST00000420166 KRTAP5-1Q6L8H4 278 aa5.26□□□□□ -1.57
HMGXB4-203ENST00000420166 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
HMGXB4-203ENST00000420166 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
HMGXB4-203ENST00000420166 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
HMGXB4-203ENST00000420166 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
HMGXB4-203ENST00000420166 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
HMGXB4-203ENST00000420166 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
HMGXB4-203ENST00000420166 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-203ENST00000420166 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
HMGXB4-203ENST00000420166 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
HMGXB4-203ENST00000420166 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
HMGXB4-203ENST00000420166 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
HMGXB4-203ENST00000420166 PRM1P04553 51 aa3.78□□□□□ -1.8
HMGXB4-203ENST00000420166 INE1O15225 51 aa3.77□□□□□ -1.81
HMGXB4-203ENST00000420166 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
HMGXB4-203ENST00000420166 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
HMGXB4-203ENST00000420166 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
HMGXB4-203ENST00000420166 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
HMGXB4-203ENST00000420166 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 101.2 ms