RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 PSPHP1O15172 72 aa7.29□□□□□ -1.24
MCF2L-212ENST00000420013 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
MCF2L-212ENST00000420013 MT1MQ8N339 61 aa7.27□□□□□ -1.25
MCF2L-212ENST00000420013 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
MCF2L-212ENST00000420013 TNP1P09430 55 aa7.25□□□□□ -1.25
MCF2L-212ENST00000420013 MT1LQ93083 61 aa7.24□□□□□ -1.25
MCF2L-212ENST00000420013 MIR22HGQ0VDD5 57 aa7.22□□□□□ -1.25
MCF2L-212ENST00000420013 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
MCF2L-212ENST00000420013 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
MCF2L-212ENST00000420013 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
MCF2L-212ENST00000420013 MT4P47944 62 aa7.12□□□□□ -1.27
MCF2L-212ENST00000420013 A6NED7 52 aa7.09□□□□□ -1.27
MCF2L-212ENST00000420013 KRTAP5-4Q6L8H1 288 aa7.07□□□□□ -1.28
MCF2L-212ENST00000420013 K7ERS5 55 aa7.05□□□□□ -1.28
MCF2L-212ENST00000420013 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
MCF2L-212ENST00000420013 AHNAK2Q8IVF2 5795 aa7.01□□□□□ -1.29
MCF2L-212ENST00000420013 BRK1Q8WUW1 75 aa6.96□□□□□ -1.3
MCF2L-212ENST00000420013 PRO0628Q9UI54 55 aa6.96□□□□□ -1.3
MCF2L-212ENST00000420013 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
MCF2L-212ENST00000420013 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
MCF2L-212ENST00000420013 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
MCF2L-212ENST00000420013 KRTAP5-10Q6L8G5 202 aa6.87□□□□□ -1.31
MCF2L-212ENST00000420013 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
MCF2L-212ENST00000420013 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
MCF2L-212ENST00000420013 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
MCF2L-212ENST00000420013 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
MCF2L-212ENST00000420013 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
MCF2L-212ENST00000420013 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
MCF2L-212ENST00000420013 KRTAP5-7Q6L8G8 165 aa6.65□□□□□ -1.34
MCF2L-212ENST00000420013 ROMO1P60602 79 aa6.62□□□□□ -1.35
MCF2L-212ENST00000420013 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
MCF2L-212ENST00000420013 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
MCF2L-212ENST00000420013 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
MCF2L-212ENST00000420013 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
MCF2L-212ENST00000420013 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
MCF2L-212ENST00000420013 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
MCF2L-212ENST00000420013 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
MCF2L-212ENST00000420013 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
MCF2L-212ENST00000420013 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
MCF2L-212ENST00000420013 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
MCF2L-212ENST00000420013 MT1AP04731 61 aa6.19□□□□□ -1.42
MCF2L-212ENST00000420013 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
MCF2L-212ENST00000420013 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
MCF2L-212ENST00000420013 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
MCF2L-212ENST00000420013 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
MCF2L-212ENST00000420013 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
MCF2L-212ENST00000420013 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
MCF2L-212ENST00000420013 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
MCF2L-212ENST00000420013 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
MCF2L-212ENST00000420013 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
MCF2L-212ENST00000420013 MUC5BQ9HC84 5762 aaPredicted RBP5.81□□□□□ -1.48
MCF2L-212ENST00000420013 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
MCF2L-212ENST00000420013 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
MCF2L-212ENST00000420013 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
MCF2L-212ENST00000420013 MT3P25713 68 aa5.66□□□□□ -1.5
MCF2L-212ENST00000420013 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
MCF2L-212ENST00000420013 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
MCF2L-212ENST00000420013 LUZP6Q538Z0 58 aa5.15□□□□□ -1.59
MCF2L-212ENST00000420013 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
MCF2L-212ENST00000420013 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
MCF2L-212ENST00000420013 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
MCF2L-212ENST00000420013 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
MCF2L-212ENST00000420013 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
MCF2L-212ENST00000420013 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
MCF2L-212ENST00000420013 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
MCF2L-212ENST00000420013 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
MCF2L-212ENST00000420013 H3BS24 57 aa4.47□□□□□ -1.69
MCF2L-212ENST00000420013 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
MCF2L-212ENST00000420013 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
MCF2L-212ENST00000420013 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
MCF2L-212ENST00000420013 INE1O15225 51 aa4.26□□□□□ -1.73
MCF2L-212ENST00000420013 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
MCF2L-212ENST00000420013 PHGR1C9JFL3 82 aa4□□□□□ -1.77
MCF2L-212ENST00000420013 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
MCF2L-212ENST00000420013 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
MCF2L-212ENST00000420013 PRM1P04553 51 aa3.4□□□□□ -1.87
MCF2L-212ENST00000420013 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
MCF2L-212ENST00000420013 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 1448.3 ms