RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 MT1EP04732 61 aa5.61□□□□□ -1.51
SYNGAP1-202ENST00000418600 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
SYNGAP1-202ENST00000418600 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
SYNGAP1-202ENST00000418600 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
SYNGAP1-202ENST00000418600 MT1LQ93083 61 aa5.57□□□□□ -1.52
SYNGAP1-202ENST00000418600 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
SYNGAP1-202ENST00000418600 MT1MQ8N339 61 aa5.5□□□□□ -1.53
SYNGAP1-202ENST00000418600 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
SYNGAP1-202ENST00000418600 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
SYNGAP1-202ENST00000418600 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
SYNGAP1-202ENST00000418600 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
SYNGAP1-202ENST00000418600 MT3P25713 68 aa5.38□□□□□ -1.55
SYNGAP1-202ENST00000418600 SYNE2Q8WXH0 6885 aaKnown RBP5.35□□□□□ -1.55
SYNGAP1-202ENST00000418600 KRTAP2-2Q9BYT5 123 aa5.34□□□□□ -1.55
SYNGAP1-202ENST00000418600 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
SYNGAP1-202ENST00000418600 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
SYNGAP1-202ENST00000418600 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
SYNGAP1-202ENST00000418600 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
SYNGAP1-202ENST00000418600 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
SYNGAP1-202ENST00000418600 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.57
SYNGAP1-202ENST00000418600 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
SYNGAP1-202ENST00000418600 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
SYNGAP1-202ENST00000418600 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
SYNGAP1-202ENST00000418600 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
SYNGAP1-202ENST00000418600 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
SYNGAP1-202ENST00000418600 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
SYNGAP1-202ENST00000418600 MT1AP04731 61 aa5.04□□□□□ -1.6
SYNGAP1-202ENST00000418600 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
SYNGAP1-202ENST00000418600 PRM1P04553 51 aa4.89□□□□□ -1.63
SYNGAP1-202ENST00000418600 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SYNGAP1-202ENST00000418600 NEBP20929 6669 aa4.74□□□□□ -1.65
SYNGAP1-202ENST00000418600 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
SYNGAP1-202ENST00000418600 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SYNGAP1-202ENST00000418600 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
SYNGAP1-202ENST00000418600 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.66
SYNGAP1-202ENST00000418600 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
SYNGAP1-202ENST00000418600 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
SYNGAP1-202ENST00000418600 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
SYNGAP1-202ENST00000418600 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
SYNGAP1-202ENST00000418600 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
SYNGAP1-202ENST00000418600 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
SYNGAP1-202ENST00000418600 USH2AO75445 5202 aa4.36□□□□□ -1.71
SYNGAP1-202ENST00000418600 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SYNGAP1-202ENST00000418600 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
SYNGAP1-202ENST00000418600 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
SYNGAP1-202ENST00000418600 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
SYNGAP1-202ENST00000418600 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
SYNGAP1-202ENST00000418600 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
SYNGAP1-202ENST00000418600 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
SYNGAP1-202ENST00000418600 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
SYNGAP1-202ENST00000418600 KMT2DO14686 5537 aa3.78□□□□□ -1.8
SYNGAP1-202ENST00000418600 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
SYNGAP1-202ENST00000418600 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
SYNGAP1-202ENST00000418600 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
SYNGAP1-202ENST00000418600 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
SYNGAP1-202ENST00000418600 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
SYNGAP1-202ENST00000418600 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
SYNGAP1-202ENST00000418600 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
SYNGAP1-202ENST00000418600 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
SYNGAP1-202ENST00000418600 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
SYNGAP1-202ENST00000418600 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SYNGAP1-202ENST00000418600 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
SYNGAP1-202ENST00000418600 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
SYNGAP1-202ENST00000418600 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SYNGAP1-202ENST00000418600 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
SYNGAP1-202ENST00000418600 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
SYNGAP1-202ENST00000418600 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
SYNGAP1-202ENST00000418600 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
SYNGAP1-202ENST00000418600 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
SYNGAP1-202ENST00000418600 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SYNGAP1-202ENST00000418600 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
SYNGAP1-202ENST00000418600 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
SYNGAP1-202ENST00000418600 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
SYNGAP1-202ENST00000418600 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SYNGAP1-202ENST00000418600 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SYNGAP1-202ENST00000418600 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
SYNGAP1-202ENST00000418600 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 70.3 ms