RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
NUP50-204ENST00000417702 A6NED7 52 aa5.6□□□□□ -1.51
NUP50-204ENST00000417702 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
NUP50-204ENST00000417702 MT1GP13640 62 aa5.54□□□□□ -1.52
NUP50-204ENST00000417702 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
NUP50-204ENST00000417702 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
NUP50-204ENST00000417702 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
NUP50-204ENST00000417702 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
NUP50-204ENST00000417702 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
NUP50-204ENST00000417702 MT1LQ93083 61 aa5.45□□□□□ -1.54
NUP50-204ENST00000417702 GPR98Q8WXG9 6306 aa5.43□□□□□ -1.54
NUP50-204ENST00000417702 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
NUP50-204ENST00000417702 MT1MQ8N339 61 aa5.42□□□□□ -1.54
NUP50-204ENST00000417702 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
NUP50-204ENST00000417702 PMAIP1Q13794 54 aa5.34□□□□□ -1.55
NUP50-204ENST00000417702 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
NUP50-204ENST00000417702 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
NUP50-204ENST00000417702 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
NUP50-204ENST00000417702 ROMO1P60602 79 aa5.26□□□□□ -1.57
NUP50-204ENST00000417702 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
NUP50-204ENST00000417702 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
NUP50-204ENST00000417702 MT4P47944 62 aa5.21□□□□□ -1.58
NUP50-204ENST00000417702 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
NUP50-204ENST00000417702 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
NUP50-204ENST00000417702 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
NUP50-204ENST00000417702 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
NUP50-204ENST00000417702 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
NUP50-204ENST00000417702 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
NUP50-204ENST00000417702 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
NUP50-204ENST00000417702 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
NUP50-204ENST00000417702 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
NUP50-204ENST00000417702 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
NUP50-204ENST00000417702 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
NUP50-204ENST00000417702 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
NUP50-204ENST00000417702 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
NUP50-204ENST00000417702 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
NUP50-204ENST00000417702 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
NUP50-204ENST00000417702 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
NUP50-204ENST00000417702 KRTAP5-7Q6L8G8 165 aa4.8□□□□□ -1.64
NUP50-204ENST00000417702 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
NUP50-204ENST00000417702 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
NUP50-204ENST00000417702 MT1AP04731 61 aa4.65□□□□□ -1.67
NUP50-204ENST00000417702 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
NUP50-204ENST00000417702 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
NUP50-204ENST00000417702 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
NUP50-204ENST00000417702 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
NUP50-204ENST00000417702 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
NUP50-204ENST00000417702 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
NUP50-204ENST00000417702 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
NUP50-204ENST00000417702 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
NUP50-204ENST00000417702 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
NUP50-204ENST00000417702 MT3P25713 68 aa4.27□□□□□ -1.73
NUP50-204ENST00000417702 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
NUP50-204ENST00000417702 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
NUP50-204ENST00000417702 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
NUP50-204ENST00000417702 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
NUP50-204ENST00000417702 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
NUP50-204ENST00000417702 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
NUP50-204ENST00000417702 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
NUP50-204ENST00000417702 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
NUP50-204ENST00000417702 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
NUP50-204ENST00000417702 H3BS24 57 aa3.81□□□□□ -1.8
NUP50-204ENST00000417702 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
NUP50-204ENST00000417702 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
NUP50-204ENST00000417702 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
NUP50-204ENST00000417702 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
NUP50-204ENST00000417702 INE1O15225 51 aa3.42□□□□□ -1.86
NUP50-204ENST00000417702 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
NUP50-204ENST00000417702 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
NUP50-204ENST00000417702 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
NUP50-204ENST00000417702 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
NUP50-204ENST00000417702 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
NUP50-204ENST00000417702 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
NUP50-204ENST00000417702 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
NUP50-204ENST00000417702 PRM1P04553 51 aa2.69□□□□□ -1.98
NUP50-204ENST00000417702 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
NUP50-204ENST00000417702 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
NUP50-204ENST00000417702 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 88.6 ms