RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651		A8MUN3	132 aa		3.5	□□□□□ -1.85
NIF3L1-206	ENST00000416651	LCA10	Q71F78	164 aa		3.5	□□□□□ -1.85
NIF3L1-206	ENST00000416651	SPTSSB	Q8NFR3	76 aa		3.5	□□□□□ -1.85
NIF3L1-206	ENST00000416651	C8orf17	Q9NRJ1	99 aa		3.5	□□□□□ -1.85
NIF3L1-206	ENST00000416651	MT4	P47944	62 aa		3.49	□□□□□ -1.85
NIF3L1-206	ENST00000416651	KTN1-AS1	Q86SY8	53 aa		3.49	□□□□□ -1.85
NIF3L1-206	ENST00000416651		Q5W150	140 aa		3.48	□□□□□ -1.85
NIF3L1-206	ENST00000416651	COA5	Q86WW8	74 aa		3.47	□□□□□ -1.85
NIF3L1-206	ENST00000416651	LOC101927531	A0A1B0GV80	90 aa		3.46	□□□□□ -1.86
NIF3L1-206	ENST00000416651	KRTAP5-7	Q6L8G8	165 aa		3.46	□□□□□ -1.86
NIF3L1-206	ENST00000416651	CSAG1	Q6PB30	78 aa		3.46	□□□□□ -1.86
NIF3L1-206	ENST00000416651		S4R3F8	94 aa		3.46	□□□□□ -1.86
NIF3L1-206	ENST00000416651	CDC42SE1	Q9NRR8	79 aa		3.45	□□□□□ -1.86
NIF3L1-206	ENST00000416651	PRO2289	Q9P1D8	64 aa		3.45	□□□□□ -1.86
NIF3L1-206	ENST00000416651	NDUFAF8	A1L188	74 aa		3.44	□□□□□ -1.86
NIF3L1-206	ENST00000416651	C7orf65	Q6ZTY9	151 aa		3.43	□□□□□ -1.86
NIF3L1-206	ENST00000416651	LINC01558	Q9Y6Z2	57 aa		3.43	□□□□□ -1.86
NIF3L1-206	ENST00000416651	SPRR5	A0A1B0GTR4	108 aa		3.42	□□□□□ -1.86
NIF3L1-206	ENST00000416651	MMP24-AS1	A0A0U1RRL7	71 aa		3.41	□□□□□ -1.86
NIF3L1-206	ENST00000416651	ACYP2	P14621	99 aa		3.4	□□□□□ -1.87
NIF3L1-206	ENST00000416651	MRPL34	Q9BQ48	92 aa	Known RBP	3.4	□□□□□ -1.87
NIF3L1-206	ENST00000416651	LCE3E	Q5T5B0	92 aa		3.39	□□□□□ -1.87
NIF3L1-206	ENST00000416651		K7ERS5	55 aa		3.37	□□□□□ -1.87
NIF3L1-206	ENST00000416651	CRIPT	Q9P021	101 aa		3.37	□□□□□ -1.87
NIF3L1-206	ENST00000416651	LUZP6	Q538Z0	58 aa		3.35	□□□□□ -1.87
NIF3L1-206	ENST00000416651		A0A1B0GU69	56 aa		3.34	□□□□□ -1.87
NIF3L1-206	ENST00000416651	PLAC4	Q8WY50	150 aa		3.33	□□□□□ -1.88
NIF3L1-206	ENST00000416651	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.32	□□□□□ -1.88
NIF3L1-206	ENST00000416651	UQCR11	O14957	56 aa		3.3	□□□□□ -1.88
NIF3L1-206	ENST00000416651		A8MU10	97 aa		3.28	□□□□□ -1.88
NIF3L1-206	ENST00000416651	MIR22HG	Q0VDD5	57 aa		3.28	□□□□□ -1.88
NIF3L1-206	ENST00000416651	DMAC1	Q96GE9	116 aa		3.28	□□□□□ -1.88
NIF3L1-206	ENST00000416651	KRTAP19-3	Q7Z4W3	81 aa		3.27	□□□□□ -1.89
NIF3L1-206	ENST00000416651	KRTAP19-7	Q3SYF9	63 aa		3.26	□□□□□ -1.89
NIF3L1-206	ENST00000416651	SPATA8	Q6RVD6	105 aa		3.25	□□□□□ -1.89
NIF3L1-206	ENST00000416651	LINC01554	Q52M75	96 aa		3.24	□□□□□ -1.89
NIF3L1-206	ENST00000416651	ADM2	Q7Z4H4	148 aa		3.24	□□□□□ -1.89
NIF3L1-206	ENST00000416651	MT1E	P04732	61 aa		3.23	□□□□□ -1.89
NIF3L1-206	ENST00000416651	KRTAP5-8	O75690	187 aa		3.19	□□□□□ -1.9
NIF3L1-206	ENST00000416651	LCE1C	Q5T751	118 aa		3.19	□□□□□ -1.9
NIF3L1-206	ENST00000416651	LCE1B	Q5T7P3	118 aa		3.19	□□□□□ -1.9
NIF3L1-206	ENST00000416651		H0YAA0	97 aa		3.18	□□□□□ -1.9
NIF3L1-206	ENST00000416651		P0C880	135 aa		3.15	□□□□□ -1.91
NIF3L1-206	ENST00000416651		M0QZ58	72 aa		3.12	□□□□□ -1.91
NIF3L1-206	ENST00000416651	KRTAP20-2	Q3LI61	65 aa		3.12	□□□□□ -1.91
NIF3L1-206	ENST00000416651	MT1M	Q8N339	61 aa		3.12	□□□□□ -1.91
NIF3L1-206	ENST00000416651		R4GN34	69 aa		3.11	□□□□□ -1.91
NIF3L1-206	ENST00000416651		A0A1B0GU33	70 aa		3.1	□□□□□ -1.91
NIF3L1-206	ENST00000416651	MT1G	P13640	62 aa		3.09	□□□□□ -1.91
NIF3L1-206	ENST00000416651	KRTAP25-1	Q3LHN0	102 aa		3.07	□□□□□ -1.92
NIF3L1-206	ENST00000416651	AHNAK	Q09666	5890 aa	Known RBP	3.04	□□□□□ -1.92
NIF3L1-206	ENST00000416651	KRTAP19-5	Q3LI72	72 aa		3.04	□□□□□ -1.92
NIF3L1-206	ENST00000416651	MUC5AC	P98088	5654 aa		3.03	□□□□□ -1.92
NIF3L1-206	ENST00000416651	SPINT4	Q6UDR6	99 aa		3.01	□□□□□ -1.93
NIF3L1-206	ENST00000416651	MUC5B	Q9HC84	5762 aa	Predicted RBP	3	□□□□□ -1.93
NIF3L1-206	ENST00000416651	ROMO1	P60602	79 aa		3	□□□□□ -1.93
NIF3L1-206	ENST00000416651	MT1L	Q93083	61 aa		3	□□□□□ -1.93
NIF3L1-206	ENST00000416651	PP632	Q6XCG6	107 aa		2.99	□□□□□ -1.93
NIF3L1-206	ENST00000416651	SYNE1	Q8NF91	8797 aa	Known RBP	2.95	□□□□□ -1.94
NIF3L1-206	ENST00000416651		A0A0D9SG42	100 aa		2.89	□□□□□ -1.95
NIF3L1-206	ENST00000416651	KRTAP12-4	P60329	112 aa		2.85	□□□□□ -1.95
NIF3L1-206	ENST00000416651	KRTAP13-4	Q3LI77	160 aa		2.78	□□□□□ -1.96
NIF3L1-206	ENST00000416651	MUC19	Q7Z5P9	8384 aa		2.77	□□□□□ -1.97
NIF3L1-206	ENST00000416651	C10orf95	Q9H7T3	257 aa		2.75	□□□□□ -1.97
NIF3L1-206	ENST00000416651	KRTAP12-1	P59990	96 aa		2.72	□□□□□ -1.97
NIF3L1-206	ENST00000416651	LCE3D	Q9BYE3	92 aa		2.65	□□□□□ -1.99
NIF3L1-206	ENST00000416651	KRTAP6-1	Q3LI64	71 aa		2.61	□□□□□ -1.99
NIF3L1-206	ENST00000416651	KRTAP6-2	Q3LI66	62 aa		2.56	□□□□□ -2
NIF3L1-206	ENST00000416651	TNP1	P09430	55 aa		2.55	□□□□□ -2
NIF3L1-206	ENST00000416651	KRTAP12-3	P60328	96 aa		2.53	□□□□□ -2
NIF3L1-206	ENST00000416651	INE1	O15225	51 aa		2.51	□□□□□ -2.01
NIF3L1-206	ENST00000416651	MT1A	P04731	61 aa		2.51	□□□□□ -2.01
NIF3L1-206	ENST00000416651	KRTAP21-2	Q3LI59	83 aa		2.33	□□□□□ -2.04
NIF3L1-206	ENST00000416651	PHGR1	C9JFL3	82 aa		2.09	□□□□□ -2.07
NIF3L1-206	ENST00000416651	PRM1	P04553	51 aa		1.57	□□□□□ -2.16
NIF3L1-206	ENST00000416651	KRTAP21-1	Q3LI58	79 aa		1.53	□□□□□ -2.16
NIF3L1-206	ENST00000416651	MUC16	Q8WXI7	14507 aa		1.22	□□□□□ -2.21

Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms