RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
RBM39-209ENST00000416529 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
RBM39-209ENST00000416529 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
RBM39-209ENST00000416529 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
RBM39-209ENST00000416529 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
RBM39-209ENST00000416529 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
RBM39-209ENST00000416529 K7ERS5 55 aa3.2□□□□□ -1.9
RBM39-209ENST00000416529 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
RBM39-209ENST00000416529 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
RBM39-209ENST00000416529 MIR22HGQ0VDD5 57 aa3.19□□□□□ -1.9
RBM39-209ENST00000416529 MT1XP80297 61 aa3.18□□□□□ -1.9
RBM39-209ENST00000416529 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
RBM39-209ENST00000416529 A0A0D9SG42 100 aa3.16□□□□□ -1.9
RBM39-209ENST00000416529 PSPHP1O15172 72 aa3.16□□□□□ -1.9
RBM39-209ENST00000416529 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
RBM39-209ENST00000416529 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
RBM39-209ENST00000416529 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
RBM39-209ENST00000416529 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
RBM39-209ENST00000416529 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
RBM39-209ENST00000416529 A6NED7 52 aa3.13□□□□□ -1.91
RBM39-209ENST00000416529 A8MU10 97 aa3.1□□□□□ -1.91
RBM39-209ENST00000416529 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
RBM39-209ENST00000416529 CDC42SE1Q9NRR8 79 aa3.09□□□□□ -1.91
RBM39-209ENST00000416529 SPRR2EP22531 72 aa3.07□□□□□ -1.92
RBM39-209ENST00000416529 SPRR2BP35325 72 aa3.07□□□□□ -1.92
RBM39-209ENST00000416529 SPRR2AP35326 72 aa3.07□□□□□ -1.92
RBM39-209ENST00000416529 TNP1P09430 55 aa3.05□□□□□ -1.92
RBM39-209ENST00000416529 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
RBM39-209ENST00000416529 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
RBM39-209ENST00000416529 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
RBM39-209ENST00000416529 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
RBM39-209ENST00000416529 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
RBM39-209ENST00000416529 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
RBM39-209ENST00000416529 SPRR2DP22532 72 aa2.97□□□□□ -1.93
RBM39-209ENST00000416529 ROMO1P60602 79 aa2.94□□□□□ -1.94
RBM39-209ENST00000416529 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
RBM39-209ENST00000416529 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
RBM39-209ENST00000416529 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
RBM39-209ENST00000416529 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.95
RBM39-209ENST00000416529 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
RBM39-209ENST00000416529 MT1EP04732 61 aa2.82□□□□□ -1.96
RBM39-209ENST00000416529 MT1GP13640 62 aa2.81□□□□□ -1.96
RBM39-209ENST00000416529 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
RBM39-209ENST00000416529 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
RBM39-209ENST00000416529 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
RBM39-209ENST00000416529 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
RBM39-209ENST00000416529 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
RBM39-209ENST00000416529 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
RBM39-209ENST00000416529 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
RBM39-209ENST00000416529 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
RBM39-209ENST00000416529 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
RBM39-209ENST00000416529 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
RBM39-209ENST00000416529 MT1LQ93083 61 aa2.73□□□□□ -1.97
RBM39-209ENST00000416529 MT1MQ8N339 61 aa2.66□□□□□ -1.98
RBM39-209ENST00000416529 MT4P47944 62 aa2.65□□□□□ -1.99
RBM39-209ENST00000416529 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
RBM39-209ENST00000416529 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
RBM39-209ENST00000416529 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
RBM39-209ENST00000416529 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
RBM39-209ENST00000416529 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
RBM39-209ENST00000416529 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
RBM39-209ENST00000416529 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
RBM39-209ENST00000416529 MT1AP04731 61 aa2.37□□□□□ -2.03
RBM39-209ENST00000416529 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
RBM39-209ENST00000416529 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
RBM39-209ENST00000416529 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
RBM39-209ENST00000416529 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
RBM39-209ENST00000416529 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
RBM39-209ENST00000416529 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
RBM39-209ENST00000416529 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
RBM39-209ENST00000416529 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
RBM39-209ENST00000416529 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
RBM39-209ENST00000416529 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
RBM39-209ENST00000416529 INE1O15225 51 aa1.74□□□□□ -2.13
RBM39-209ENST00000416529 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
RBM39-209ENST00000416529 PRM1P04553 51 aa1.44□□□□□ -2.18
RBM39-209ENST00000416529 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
RBM39-209ENST00000416529 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 178.1 ms