RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
TRAPPC12-204ENST00000415624 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
TRAPPC12-204ENST00000415624 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
TRAPPC12-204ENST00000415624 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
TRAPPC12-204ENST00000415624 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
TRAPPC12-204ENST00000415624 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
TRAPPC12-204ENST00000415624 TNP1P09430 55 aa4.3□□□□□ -1.72
TRAPPC12-204ENST00000415624 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
TRAPPC12-204ENST00000415624 SPRR2DP22532 72 aa4.29□□□□□ -1.72
TRAPPC12-204ENST00000415624 ROMO1P60602 79 aa4.25□□□□□ -1.73
TRAPPC12-204ENST00000415624 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
TRAPPC12-204ENST00000415624 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
TRAPPC12-204ENST00000415624 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
TRAPPC12-204ENST00000415624 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
TRAPPC12-204ENST00000415624 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
TRAPPC12-204ENST00000415624 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
TRAPPC12-204ENST00000415624 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
TRAPPC12-204ENST00000415624 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
TRAPPC12-204ENST00000415624 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
TRAPPC12-204ENST00000415624 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
TRAPPC12-204ENST00000415624 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
TRAPPC12-204ENST00000415624 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
TRAPPC12-204ENST00000415624 MT1EP04732 61 aa4.04□□□□□ -1.76
TRAPPC12-204ENST00000415624 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
TRAPPC12-204ENST00000415624 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
TRAPPC12-204ENST00000415624 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
TRAPPC12-204ENST00000415624 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
TRAPPC12-204ENST00000415624 KRTAP12-3P60328 96 aa4□□□□□ -1.77
TRAPPC12-204ENST00000415624 PP632Q6XCG6 107 aa4□□□□□ -1.77
TRAPPC12-204ENST00000415624 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
TRAPPC12-204ENST00000415624 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
TRAPPC12-204ENST00000415624 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
TRAPPC12-204ENST00000415624 MT1LQ93083 61 aa3.92□□□□□ -1.78
TRAPPC12-204ENST00000415624 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
TRAPPC12-204ENST00000415624 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
TRAPPC12-204ENST00000415624 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
TRAPPC12-204ENST00000415624 MT1GP13640 62 aa3.83□□□□□ -1.8
TRAPPC12-204ENST00000415624 MT4P47944 62 aa3.83□□□□□ -1.8
TRAPPC12-204ENST00000415624 MT1MQ8N339 61 aa3.82□□□□□ -1.8
TRAPPC12-204ENST00000415624 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
TRAPPC12-204ENST00000415624 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
TRAPPC12-204ENST00000415624 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
TRAPPC12-204ENST00000415624 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
TRAPPC12-204ENST00000415624 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
TRAPPC12-204ENST00000415624 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
TRAPPC12-204ENST00000415624 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
TRAPPC12-204ENST00000415624 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC12-204ENST00000415624 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC12-204ENST00000415624 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
TRAPPC12-204ENST00000415624 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
TRAPPC12-204ENST00000415624 MT1AP04731 61 aa3.34□□□□□ -1.87
TRAPPC12-204ENST00000415624 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
TRAPPC12-204ENST00000415624 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
TRAPPC12-204ENST00000415624 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
TRAPPC12-204ENST00000415624 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
TRAPPC12-204ENST00000415624 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
TRAPPC12-204ENST00000415624 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
TRAPPC12-204ENST00000415624 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
TRAPPC12-204ENST00000415624 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
TRAPPC12-204ENST00000415624 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
TRAPPC12-204ENST00000415624 MT3P25713 68 aa3□□□□□ -1.93
TRAPPC12-204ENST00000415624 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
TRAPPC12-204ENST00000415624 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
TRAPPC12-204ENST00000415624 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
TRAPPC12-204ENST00000415624 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
TRAPPC12-204ENST00000415624 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC12-204ENST00000415624 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
TRAPPC12-204ENST00000415624 INE1O15225 51 aa2.59□□□□□ -1.99
TRAPPC12-204ENST00000415624 LCE1FQ5T754 118 aa2.55□□□□□ -2
TRAPPC12-204ENST00000415624 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
TRAPPC12-204ENST00000415624 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
TRAPPC12-204ENST00000415624 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
TRAPPC12-204ENST00000415624 PRM1P04553 51 aa2.23□□□□□ -2.05
TRAPPC12-204ENST00000415624 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
TRAPPC12-204ENST00000415624 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
TRAPPC12-204ENST00000415624 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
TRAPPC12-204ENST00000415624 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TRAPPC12-204ENST00000415624 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 459.2 ms