RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 HIST1H2BLQ99880 126 aa-0.12□□□□□ -2.43
LINC00428-201ENST00000415620 CHKB-CPT1BH3BT56 60 aa-0.13□□□□□ -2.43
LINC00428-201ENST00000415620 K7ERJ3 54 aa-0.13□□□□□ -2.43
LINC00428-201ENST00000415620 UQCRQO14949 82 aa-0.13□□□□□ -2.43
LINC00428-201ENST00000415620 COX6CP09669 75 aa-0.13□□□□□ -2.43
LINC00428-201ENST00000415620 CLLU1Q5K131 121 aa-0.13□□□□□ -2.43
LINC00428-201ENST00000415620 HIST3H2BBQ8N257 126 aa-0.13□□□□□ -2.43
LINC00428-201ENST00000415620 FXYD2P54710 66 aa-0.14□□□□□ -2.43
LINC00428-201ENST00000415620 FAM240AA0A1B0GVK7 77 aa-0.15□□□□□ -2.43
LINC00428-201ENST00000415620 ATXN8Q156A1 80 aa-0.17□□□□□ -2.44
LINC00428-201ENST00000415620 SPATA45Q537H7 98 aa-0.17□□□□□ -2.44
LINC00428-201ENST00000415620 SERP1Q9Y6X1 66 aa-0.17□□□□□ -2.44
LINC00428-201ENST00000415620 TMEM218A2RU14 115 aa-0.18□□□□□ -2.44
LINC00428-201ENST00000415620 H3BPC8 53 aa-0.19□□□□□ -2.44
LINC00428-201ENST00000415620 UBL5Q9BZL1 73 aa-0.19□□□□□ -2.44
LINC00428-201ENST00000415620 TAX1BP3O14907 124 aa-0.2□□□□□ -2.44
LINC00428-201ENST00000415620 COX8AP10176 69 aa-0.2□□□□□ -2.44
LINC00428-201ENST00000415620 MP68P56378 58 aa-0.2□□□□□ -2.44
LINC00428-201ENST00000415620 RPS28P62857 69 aaKnown RBP-0.2□□□□□ -2.44
LINC00428-201ENST00000415620 PRM1P04553 51 aa-0.21□□□□□ -2.44
LINC00428-201ENST00000415620 TMEM258P61165 79 aa-0.21□□□□□ -2.44
LINC00428-201ENST00000415620 SERP2Q8N6R1 65 aa-0.21□□□□□ -2.44
LINC00428-201ENST00000415620 VAMP8Q9BV40 100 aa-0.21□□□□□ -2.44
LINC00428-201ENST00000415620 HSBP1L1C9JCN9 74 aa-0.22□□□□□ -2.44
LINC00428-201ENST00000415620 C14orf144Q96I85 54 aa-0.22□□□□□ -2.44
LINC00428-201ENST00000415620 DLEU1O43261 78 aa-0.23□□□□□ -2.45
LINC00428-201ENST00000415620 SNURFQ9Y675 71 aa-0.23□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BKO60814 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BJP06899 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BOP23527 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BBP33778 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BDP58876 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BCP62807 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST2H2BEQ16778 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BHQ93079 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BNQ99877 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H2BMQ99879 126 aa-0.24□□□□□ -2.45
LINC00428-201ENST00000415620 HSD52Q0P140 79 aa-0.25□□□□□ -2.45
LINC00428-201ENST00000415620 Q1T7F1 81 aa-0.25□□□□□ -2.45
LINC00428-201ENST00000415620 PRR15LQ9BU68 103 aa-0.25□□□□□ -2.45
LINC00428-201ENST00000415620 H3BT86 120 aa-0.26□□□□□ -2.45
LINC00428-201ENST00000415620 KTN1-AS1Q86SY8 53 aa-0.26□□□□□ -2.45
LINC00428-201ENST00000415620 APOC3P02656 99 aa-0.27□□□□□ -2.45
LINC00428-201ENST00000415620 HIST1H4AP62805 103 aaKnown RBP-0.27□□□□□ -2.45
LINC00428-201ENST00000415620 A0A1B0GU69 56 aa-0.3□□□□□ -2.46
LINC00428-201ENST00000415620 SVBPQ8N300 66 aa-0.31□□□□□ -2.46
LINC00428-201ENST00000415620 V9GYY9 64 aa-0.32□□□□□ -2.46
LINC00428-201ENST00000415620 NDUFA5Q16718 116 aa-0.36□□□□□ -2.47
LINC00428-201ENST00000415620 ATP5EP2Q5VTU8 51 aa-0.38□□□□□ -2.47
LINC00428-201ENST00000415620 CDC42SE1Q9NRR8 79 aa-0.41□□□□□ -2.48
LINC00428-201ENST00000415620 ROMO1P60602 79 aa-0.43□□□□□ -2.48
LINC00428-201ENST00000415620 UQCR11O14957 56 aa-0.44□□□□□ -2.48
LINC00428-201ENST00000415620 INE1O15225 51 aa-0.45□□□□□ -2.48
LINC00428-201ENST00000415620 MIR22HGQ0VDD5 57 aa-0.45□□□□□ -2.48
LINC00428-201ENST00000415620 UQCR10Q9UDW1 63 aa-0.46□□□□□ -2.48
LINC00428-201ENST00000415620 S100A6P06703 90 aa-0.47□□□□□ -2.48
LINC00428-201ENST00000415620 M0R143 59 aa-0.48□□□□□ -2.49
LINC00428-201ENST00000415620 S100A1P23297 94 aa-0.48□□□□□ -2.49
LINC00428-201ENST00000415620 ETDBQ3ZM63 59 aa-0.48□□□□□ -2.49
LINC00428-201ENST00000415620 LINC00643Q86TS7 51 aa-0.49□□□□□ -2.49
LINC00428-201ENST00000415620 PYY3Q5JQD4 70 aa-0.53□□□□□ -2.49
LINC00428-201ENST00000415620 LINC01558Q9Y6Z2 57 aa-0.53□□□□□ -2.49
LINC00428-201ENST00000415620 SMIM20Q8N5G0 67 aa-0.57□□□□□ -2.5
LINC00428-201ENST00000415620 F8W1H4 67 aa-0.59□□□□□ -2.5
LINC00428-201ENST00000415620 COL5A1-AS1Q5SY13 56 aa-0.64□□□□□ -2.51
LINC00428-201ENST00000415620 GTF2H5Q6ZYL4 71 aa-0.66□□□□□ -2.52
LINC00428-201ENST00000415620 COX7CP15954 63 aa-0.71□□□□□ -2.52
LINC00428-201ENST00000415620 PMAIP1Q13794 54 aa-0.75□□□□□ -2.53
LINC00428-201ENST00000415620 SMIM6P0DI80 62 aa-0.79□□□□□ -2.54
LINC00428-201ENST00000415620 ATP5EP56381 51 aaPredicted RBP-0.81□□□□□ -2.54
LINC00428-201ENST00000415620 J3QR89 54 aa-0.83□□□□□ -2.54
LINC00428-201ENST00000415620 CCDC179H3BU77 68 aa-0.88□□□□□ -2.55
LINC00428-201ENST00000415620 A0A1B0GV90 55 aa-0.89□□□□□ -2.55
LINC00428-201ENST00000415620 BRK1Q8WUW1 75 aa-0.91□□□□□ -2.56
LINC00428-201ENST00000415620 K7ERU9 68 aa-0.98□□□□□ -2.57
LINC00428-201ENST00000415620 LOC105371267A0A1B0GV96 52 aa-1.03□□□□□ -2.57
Retrieved 77 of 20,778 RNA–protein pairs in 93.3 ms