RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-208ENST00000415548 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
CCT3-208ENST00000415548 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
CCT3-208ENST00000415548 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
CCT3-208ENST00000415548 TMEM258P61165 79 aa3.14□□□□□ -1.91
CCT3-208ENST00000415548 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
CCT3-208ENST00000415548 MT1EP04732 61 aa3.12□□□□□ -1.91
CCT3-208ENST00000415548 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
CCT3-208ENST00000415548 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
CCT3-208ENST00000415548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
CCT3-208ENST00000415548 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
CCT3-208ENST00000415548 TNP1P09430 55 aa3.05□□□□□ -1.92
CCT3-208ENST00000415548 UQCR11O14957 56 aa3.04□□□□□ -1.92
CCT3-208ENST00000415548 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
CCT3-208ENST00000415548 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
CCT3-208ENST00000415548 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
CCT3-208ENST00000415548 MT1GP13640 62 aa3□□□□□ -1.93
CCT3-208ENST00000415548 MT1LQ93083 61 aa2.99□□□□□ -1.93
CCT3-208ENST00000415548 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
CCT3-208ENST00000415548 PSPHP1O15172 72 aa2.97□□□□□ -1.93
CCT3-208ENST00000415548 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
CCT3-208ENST00000415548 MT1MQ8N339 61 aa2.97□□□□□ -1.93
CCT3-208ENST00000415548 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
CCT3-208ENST00000415548 V9GYY9 64 aa2.95□□□□□ -1.94
CCT3-208ENST00000415548 Q1T7F1 81 aa2.94□□□□□ -1.94
CCT3-208ENST00000415548 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
CCT3-208ENST00000415548 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
CCT3-208ENST00000415548 K7ERS5 55 aa2.91□□□□□ -1.94
CCT3-208ENST00000415548 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
CCT3-208ENST00000415548 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
CCT3-208ENST00000415548 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
CCT3-208ENST00000415548 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
CCT3-208ENST00000415548 A6NED7 52 aa2.86□□□□□ -1.95
CCT3-208ENST00000415548 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
CCT3-208ENST00000415548 MT3P25713 68 aa2.84□□□□□ -1.95
CCT3-208ENST00000415548 MT4P47944 62 aa2.82□□□□□ -1.96
CCT3-208ENST00000415548 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
CCT3-208ENST00000415548 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
CCT3-208ENST00000415548 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
CCT3-208ENST00000415548 ROMO1P60602 79 aa2.74□□□□□ -1.97
CCT3-208ENST00000415548 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
CCT3-208ENST00000415548 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
CCT3-208ENST00000415548 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
CCT3-208ENST00000415548 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
CCT3-208ENST00000415548 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CCT3-208ENST00000415548 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
CCT3-208ENST00000415548 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
CCT3-208ENST00000415548 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
CCT3-208ENST00000415548 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
CCT3-208ENST00000415548 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
CCT3-208ENST00000415548 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
CCT3-208ENST00000415548 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CCT3-208ENST00000415548 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
CCT3-208ENST00000415548 MT1AP04731 61 aa2.54□□□□□ -2
CCT3-208ENST00000415548 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
CCT3-208ENST00000415548 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
CCT3-208ENST00000415548 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
CCT3-208ENST00000415548 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
CCT3-208ENST00000415548 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
CCT3-208ENST00000415548 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
CCT3-208ENST00000415548 PRAC1Q96KF2 57 aa2.3□□□□□ -2.04
CCT3-208ENST00000415548 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
CCT3-208ENST00000415548 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
CCT3-208ENST00000415548 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
CCT3-208ENST00000415548 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
CCT3-208ENST00000415548 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
CCT3-208ENST00000415548 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
CCT3-208ENST00000415548 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
CCT3-208ENST00000415548 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
CCT3-208ENST00000415548 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
CCT3-208ENST00000415548 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
CCT3-208ENST00000415548 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
CCT3-208ENST00000415548 INE1O15225 51 aa1.82□□□□□ -2.12
CCT3-208ENST00000415548 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CCT3-208ENST00000415548 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
CCT3-208ENST00000415548 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
CCT3-208ENST00000415548 PRM1P04553 51 aa1.41□□□□□ -2.18
CCT3-208ENST00000415548 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CCT3-208ENST00000415548 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms